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DIGIMOUSE: A 3D Mouse Atlas

 

The Coregistered Data with the Atlas:

  • Matrix size: 380 x 992 x 208
  • Voxel size: 0.1mm x 0.1mm x 0.1mm
  • Size: ~77MB
  • The data is in ANALYZE format which can be viewed using BrainSuite
Download:

Java Viewer which shows 3D orthogonal views of registered PET, CT, Cryosections and Atlas

You need to enable Java support in your browser in order to run this applet!

The Raw Data :
Download:
Matrix size:
128 x 128 x 127
512 x 512 x 942
1704 x 2560 x 418
Voxel size:
0.4 x 0.6 x 0.4 mm3
0.1 x 0.1 x 0.1 mm3
38.8 x 38.8 x 50um3
Size:
8MB
900MB
600MB
Format:
float
float
jpeg

 

Tesselated Atlas :

  • .mat file which can be loaded in MATLAB
  • includes .txt file which has the assignments of the tetrahedrons to each organ
  • 306,773 elements and 58,244 nodes (16,164 surface nodes and 42,080 internal nodes)