= Cite Brainstorm in your publications =
Once you are done with your analysis, please don't forget about us in the redaction of your publications...

== How to cite... ==
'''... Brainstorm'''

 * Data analysis was performed with Brainstorm (Tadel et al. 2011), which is documented and freely available for download online under the GNU general public license (http://neuroimage.usc.edu/brainstorm).

'''... the CTF sample dataset (somatotopy)'''

 * The somatosensory MEG recordings were provided by Dr Sabine Meunier (Hopital de la Salpetriere, Paris) as part of the tutorial dataset distributed with Brainstorm (http://neuroimage.usc.edu/brainstorm).

'''... forward models'''

 * Spherical head model: Mosher et al. 1999
 * Overlapping spheres: Huang et al., 1999
 * OpenMEEG BEM: Gramfort et al., 2010 / Kybic et al., 2005

'''... inverse methods'''

 * Tikhonov-regularized minimum-norm:  Baillet et al., 2001. <<BR>>Default value for Tikhonov parameter is λ = 10% of maximum singular value of the lead field.
 * LCMV Beamformer: Baillet et al., 2001

''' ... the default anatomy'''

 * Colin27: MNI brain with a 1mm resolution. [[http://imaging.mrc-cbu.cam.ac.uk/imaging/MniTalairach|More info....]]

'''... FreeSurfer'''

 * Whether you are using FreeSurfer for the T1 segmentation,  the cortical atlases or the FSAverage subject default: please register  on their website ([[https://surfer.nmr.mgh.harvard.edu/registration.html|registration page]]) and cite the appropriate references.

'''... statistical analysis using non-parametric permutation tests'''

 * Permutation tests: Pantazis et al., 2005.

== Publications ==
The previous citations refer to the following publications. Further reading is available in the [[Pub|Publications]] section.

 * Tadel F, Baillet S, Mosher JC, Pantazis D, Leahy RM, “Brainstorm: A  User-Friendly Application for MEG/EEG Analysis,” Computational  Intelligence and Neuroscience, vol. 2011, Article ID 879716, 13 pages,  2011. doi:10.1155/2011/879716
 * J.C. Mosher, S. Baillet, F. Darvas, D. Pantazis , E.K. Yildirim, R.M. Leahy, “BrainStorm Electromagnetic Imaging Software”, 5th International Symposium on Noninvasive Functional Source Imaging within the Human Brain and Heart (NFSI 2005), Minnesota, May 12-15, 2005.
 * M.X. Huang, J.C. Mosher and R.M. Leahy, "A sensor-weighted overlapping-sphere head model and exhaustive head model comparison for MEG",Physics in Medicine and Biology, 44(2): 423-440, Feb. 1999.
 * S. Baillet, J.C. Mosher, R.M. Leahy, "Electromagnetic Brain Mapping", IEEE Signal Processing Magazine, 18(6): 14-30, Nov 2001.
 * D. Pantazis, T. E Nichols, S. Baillet, RM Leahy, A Comparison of Random Field Theory and Permutation Methods for the Statistical Analysis of MEG data, Neuroimage, 25(2):383-394, 2005
 * J.C. Mosher, R.M. Leahy, and P.S. Lewis, “EEG and MEG: Forward solutions for inverse methods,” IEEE Trans. Biomed. Eng., vol. 46, pp. 245-259, 1999.
 * A. Gramfort, T. Papadopoulo, E. Olivi, M. Clerc. OpenMEEG: opensource software for quasistatic bioelectromagnetics, [[http://www.biomedical-engineering-online.com/content/9/1/45|BioMedical Engineering OnLine 45:9, 2010]]
 * Kybic  J, Clerc M, Abboud T, Faugeras O, Keriven R, Papadopoulo T.         A  common formalism for the integral formulations of the forward EEG  problem. [[http://ieeexplore.ieee.org/xpls/abs_all.jsp?isnumber=30034&arnumber=1375158&count=10&index=1|IEEE Transactions on Medical Imaging, 24:12-28, 2005.]] [[ftp://ftp-sop.inria.fr/odyssee/Publications/2005/kybic-clerc-etal:05.pdf|[pdf]]]