Tuts #1-5 should have been done by the user
Presentation of the experiment: * finger tapping + description
- Aude's data: 2 runs of XXX minutes each
- MRI anatomy 3T
- link to dataset
Import anatomy + MRI
import Brainvisa head mesh and MRI file + provide datasets
mark fudicials
Import NIRS functional data
NIRS Acquisition + description
dataset files:
* 2 nirs files with proper SrcPos and DetPos fields
-> generate these from brainsight output merged with montage coords
-> check if there is a way to directly have this from brainsight without having to forge it
1 file of digitized coords of fiducials (NAS, LE, RE) as a txt file. Coords should be in the same referential as SrcPos and DetPos
NIRS-MRI coregistration
Use automatic registration
Keep only step 1
Display Optodes (adapted from “Display Sensors”)
- no helmet here -> should be able to show optode positions over head meshSKip manual registration
Edit the channel file
Introduce new nomenclature
S1D1WL1 NIRS_WL1 …S1D1WL2 NIRS_WL2 …
Visualize signals
Depends on tut #5
Introduce default channel groups: ALL, WL1, WL2
Just adapt sections “Montage selection” and “Channel selection”