= Digimouse: Download = . [[Digimouse|Overview]] | [[Digimouse_Data_Acquisition|Data Acquisition]] | [[Digimouse_Registration|Registration]] | [[Digimouse_Creation_of_Atlas|Creation of Atlas]] | [[Digimouse_Simulations|Simulations]] | '''Download''' ---- === The Coregistered Data with the Atlas === * Matrix size: 380 x 992 x 208 * Voxel size: 0.1mm x 0.1mm x 0.1mm * Size: ~77MB * The data is in ANALYZE format which can be viewed using BrainSuite. * [[http://neuroimage.usc.edu/mouse_atlas/pet_data.zip|PET Data]] * [[http://neuroimage.usc.edu/mouse_atlas/ct_data.zip|CT Data]] * [[http://neuroimage.usc.edu/mouse_atlas/cryo_data.zip|Cryosection Data]] * [[http://neuroimage.usc.edu/mouse_atlas/atlas.zip|Atlas Data]] '''[[http://neuroimage.usc.edu/Digimouse_jiv.html|Java Viewer]] which shows 3D orthogonal views of registered PET, CT, Cryosections and Atlas''' (You need to enable Java support in your browser in order to run this applet) <
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> ---- === The Raw Data === <
> ||Download: <
> Matrix size: <
> Voxel size: <
> Size: <
> Format: ||'''[[http://neuroimage.usc.edu/mouse_atlas/pet_raw_data.zip|PET Data]]''' <
>128 x 127 x 128 <
> 0.4 x 0.4 x 0.6 mm^3^ <
> 8MB <
> Float ||'''[[http://neuroimage.usc.edu/mouse_atlas/ct_raw_data.zip|CT Data]]''' <
> 512 x 942 x 512 <
> 0.1 x 0.1 x 0.1 mm^3^ <
> 900MB <
> Float ||'''[[http://neuroimage.usc.edu/mouse_atlas/raw_cryosections.zip|Cryosection Data]]''' <
>1704 x 2560 x 418 <
>38.8 x 38.8 x 50um^3^ <
> 600MB <
> jpeg || <
> ---- === Tesselated Atlas === * [[http://neuroimage.usc.edu/mouse_atlas/tesselated_atlas.zip|.mat file]] which can be loaded in MATLAB * includes .txt file which has the assignments of the tetrahedrons to each organ * 306,773 elements and 58,244 nodes (16,164 surface nodes and 42,080 internal nodes)