Installation & Updates

Brainstorm is available under two distinct forms:

1. a stand-alone executable application (Matlab not required)
2. an open-source Matlab application (Matlab required).

The stand-alone application is a Java executable that is expected to run on most operating systems. Please let us know through the forum if you are running into compatibility issues.

Requirements

• Operating system: Any platform for which Matlab is available

• Matlab version: R2006a (7.2)

• Matlab Signal Processing Toolbox is optional, but strongly recommended.

Installation

1. Visit the Download section, create an account, and follow the indications.

2. Download the latest brainstorm_....zip archive

3. Unzip it somewhere you usually put your program files. For example:
   

   • Windows: Program Files\brainstorm3

   • Linux: /usr/local/brainstorm3 (or $HOME/brainstorm3 if you are not admin)

   • MacOS: Applications/brainstorm3

4. Create an empty folder "brainstorm_db" to store your Brainstorm database. For example:

   • Windows: My documents\brainstorm_db

   • Linux: /home/username/brainstorm_db

   • MacOS: Documents/brainstorm_db

Start the application

With Matlab

1. Start Matlab

2. Do NOT add brainstorm3 folder to your path

3. Go to the brainstorm3 folder
4. Type "brainstorm" in the command window

5. Visit the Tutorials section to learn what to do next.

Without Matlab

1. Go to the Download section again

2. Download the Matlab Compiler Runtime (MCR) for your operating system.

3. Install it:

   • Windows: Double-click on the .exe and follow the instructions

   • Linux: From a terminal, unzip .zip, then run ./install

   • MacOS: Unzip, install

4. Run the program in brainstorm3/bin/R2011b/

   • Windows: Double-click on brainstorm3.jar (no console) or brainstorm3.bat (console)

   • Linux: From a terminal, run ./brainstorm.command

   • MacOS: Double-click on brainstorm.command

5. Select the folder in which you installed the MCR library (Linux and MacOS only)

6. Visit the Tutorials section to learn what to do next.

Updates

Brainstorm is improving every day. It is recommended that you update the software regularly.

• Automatic updates (Matlab only):
  • When you start Brainstorm, it checks online if your version is older than a month.

  • To enable / disable those automatic updates, edit the software preferences (File > Set preferences...)

• Manual updates (Matlab only):

  • Menu Help > Update Brainstorm, in the main application window.

  • If it doesn't work: check that you have the rights to write in the brainstorm3 folder.
• Stand-alone version (or in case those simple methods do not work)
  • Delete the old brainstorm3 folder (don't worry, it's not going to remove your database)
  • Follow the installation instructions again (previous section)