= Introduction tutorials: Editing process =
http://neuroimage.usc.edu/brainstorm/Tutorials
Redactors:
* '''Francois Tadel''': Montreal Neurological Institute
* '''Elizabeth Bock''': Montreal Neurological Institute
Reviewers ''[current reviewing status] ''
* '''Sylvain Baillet''': Montreal Neurological Institute ''[not started]''
* '''Richard Leahy''': University of Southern California ''[validated 1-9]''
* '''John Mosher''': Cleveland Clinic ''[not started]''
* '''Dimitrios Pantazis''': Massachusetts Institute of Technology ''[validated 1-15]''
Expected timeline (2016)
* '''March''': Tutorials #1-#21 (interface and pre-processing)
* '''April''': Tutorials #22-#24 (source estimation and time-frequency)
* '''May-June''': Tutorials #25-#28 (statistics and workflows)
* '''July-Sept''': Cross-validation of the pipeline and the results with MNE, FieldTrip and SPM
* '''October''': Presentation during a satellite meeting at the Biomag 2016 conference
* '''Nov-Dec''': Connectivity tutorial
<
>
== Tutorial 10: Power spectrum and frequency filters ==
[CODE]
* Richard, John, Sylvain: Finish the evaluation of the band-pass filters used in Brainstorm
* Francois: Mark with an extended event the time segments that we cannot trust
* Francois: Add warning if recordings are not long enough
* Francois: Check that the bandpass filter is always used with enough data (Hilbert transform, SSP)
[ONLINE DOC]
* Richard, John, Sylvain: Section [[http://neuroimage.usc.edu/brainstorm/Tutorials/ArtifactsFilter#What_filters_to_apply.3F_.5BTODO.5D|What filters to apply?]]
* Richard, John, Sylvain: Section [[http://neuroimage.usc.edu/brainstorm/Tutorials/ArtifactsFilter#Filters_specifications_.5BTODO.5D|Filters specifications]]
== Tutorial 13: Artifact cleaning with SSP ==
[CODE] [ONLINE DOC]
* Francois: Check the length needed to filter the recordings (after finishing tutorial #10) <
>Section [[http://neuroimage.usc.edu/brainstorm/Tutorials/ArtifactsSsp#SSP_Algorithm_.5BTODO.5D|SSP Algorithm]]
== Tutorial 15: Import epochs ==
[ONLINE DOC]
* Richard, Sylvain, John, Francois: Define recommendations for epoch lengths (after finishing #10) <
>Section [[http://neuroimage.usc.edu/brainstorm/Tutorials/Epoching#Epoch_length_.5BTODO.5D|Epoch length]]
== Tutorial 20: Head modelling ==
[ONLINE DOC]
* John, Richard, Sylvain: In-depth review of this sensitive tutorial
* John, Richard, Sylvain: Section [[http://neuroimage.usc.edu/brainstorm/Tutorials/AllIntroduction#Tutorials.2FHeadModel.References_.5BTODO.5D|References]]
== Tutorial 22: Source estimation ==
[CODE]
* John: Dipole scanning: Wrong orientations
* John: Inverse code: sLORETA
* John: Inverse code: NAI
* John: Inverse code: Mixed head models
* John, Richard, Sylvain: How to normalize unconstrained sources ?
* Francois: Remove the warning messages in the interface
* Francois: Call FieldTrip headmodels and beamformers
[ONLINE DOC]
== Connectivity ==
* Richard, Sylvain: Define example dataset and precise results to obtain from them
* Richard: Define
== Other analysis scenarios ==
* Francois: Update all the tutorials (100 pages)
* Francois: Add number of pages in the tutorials
== Phantom tutorial (for validation) ==
* John: Prepare recordings to distribute on the [[http://neuroimage.usc.edu/brainstorm/Tutorials/Phantom|tutorial page]]
* Francois: Prepare the anatomy
* Francois: Prepare an analysis script
* Francois: Edit the tutorial page
== Final steps ==
* Check that the script tutorial_introduction.m produces the same output as the screen captures
* Check all the links in all the pages
* Check the number of pages for each tutorial
* Reference on ResearchGate, Academia and Google Scholar: <
>http://neuroimage.usc.edu/brainstorm/Tutorials/AllIntroduction