## page was renamed from WorkshopGSAN2023
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= Montreal, Canada: June 8, 2023 =
Introduction to Brainstorm and hands-on workshop, part of [[https://gsaneuro.com/|GSAN]] workshops at McGill University. <<BR>> In-person Brainstorm training session.

== General information ==
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<<HTML(<TR><TD>)>>'''Where'''<<HTML(</TD><TD>)>>Stewart Building in room N2/2 <<HTML(</TD></TR>)>>

<<HTML(<TR><TD>)>>'''When'''<<HTML(</TD><TD>)>>Thursday, June 8 2023: 10:00-14:00<<HTML(</TD></TR>)>>

<<HTML(<TR><TD>)>>'''Instructors'''<<HTML(</TD><TD>)>>[[AboutUs/SylvainBaillet|Sylvain Baillet]] and [[AboutUs/RaymundoCassani|Raymundo Cassani]] <<BR>> (Montreal Neurological Institute / McGill, Canada)<<HTML(</TD></TR>)>>

<<HTML(<TR><TD>)>>'''Audience'''<<HTML(</TD><TD>)>>Users interested in analyzing MEG/EEG/sEEG recordings using Brainstorm.<<BR>>Some experience with MEG/EEG is recommended. Teaching in English.<<BR>>Number of participants: 19 <<HTML(</TD></TR>)>>

<<HTML(<TR><TD>)>>'''Slides'''<<HTML(</TD><TD>)>> [[https://box.bic.mni.mcgill.ca/s/DPgOpQLNO5MBDjk|Poster]] | [[https://box.bic.mni.mcgill.ca/s/70mle3ZxAA6Bttp|Slides]] | [[https://box.bic.mni.mcgill.ca/s/9BXiGy7WpKhgnxu|Walkthrough]] | [[https://forms.gle/H6EqgdqNqDa9DKjh6|Survey]]<<HTML(</TD></TR>)>>

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== Requirements ==
In order to make the workshop as efficient as possible, we ask all the attendees to: <<HTML(<FONT color=red>)>>'''download, install and test'''<<HTML(</FONT>)>> the software and <<HTML(<FONT color=red>)>>'''download'''<<HTML(</FONT>)>> the workshop dataset on their laptops prior to the workshop.

If you encounter any trouble at setting Brainstorm please show up 30 min before the start of the workshop.

== Installing Brainstorm ==
Please read carefully the following instructions on:<<BR>>[[WorkshopGeneralInstall|preparing your laptop for the training]]

== Workshop dataset ==
The workshop dataset is a pre-processed version of the dataset in used in the [[Tutorials/CorticomuscularCoherence|Brainstorm tutorial on corticomuscular coherence]]. It consists of simultaneous MEG and EMG (left arm) recordings during prompted left arm movements. A full description of the dataset can be found [[https://neuroimage.usc.edu/brainstorm/Tutorials/CorticomuscularCoherence#Dataset_description|here]].

Once you have successfully installed and tested Brainstorm (previous section), proceed to download the dataset for the workshop.

 1. Download the tutorial dataset (430 MB):
 https://box.bic.mni.mcgill.ca/s/4Jlbmjy73GUNCZ9
 1. Unzip the downloaded file on your desktop
 1. Final check: you should have 3 folders on your desktop:
  * '''`brainstorm3`''': Program folder, with the source code and the compiled executable
  * '''`brainstorm_db`''': Brainstorm database (empty)
  * '''`workshop_gsan`''': Dataset used during the workshop session

== Program ==
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<<HTML(<TR><TD>)>>10:00-10:30<<HTML(</TD><TD>)>>Introduction to Brainstorm (lecture)<<HTML(</TD></TR>)>>

<<HTML(<TR><TD>)>>10:30-11:20<<HTML(</TD><TD>)>>'''Loading anatomy and recordings'''

Set anatomy

Review RAW recordings

Import events

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<<HTML(<TR><TD>)>>11:20-12:30<<HTML(</TD><TD>)>>'''Pre-processing'''

Frequency filters

Artifact detection

Artifact correction with SSP <<HTML(</TD></TR>)>>

<<HTML(<TR><TD>)>>12:30-13:15<<HTML(</TD><TD>)>>''Lunch''<<HTML(</TD></TR>)>>

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<<HTML(<TR><TD>)>>13:15-14:00<<HTML(</TD><TD>)>>'''Analysis'''

Coherence (sensor level)

Head modelling, cortical source reconstruction

Coherence (source level) <<HTML(</TD></TR>)>>

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We provide [[https://box.bic.mni.mcgill.ca/s/9BXiGy7WpKhgnxu|a detailed step-by-step walkthrough]] of the data analyses performed at the training.