Thank you for your reply. I have attempted the process you suggested and observed a missing argument error when using the generated .m
script calling the subfunction Compute
under process_dwi2dti.m.
This issue can be reproduced by:
Step1: Import > Import anatomy > Import MRI
Step2: Import > Import anatomy > Convert DWT to DTI
Step3: use the menu Generate .m script
.
Step4: Run the Generate .m script
.
This issue is not caught when manually click DWI2DTI from the GUI because the call go through
The generated script call:
Probably this would be fixed in your next build, may I ask if I just add [ ]
for the T1BstFile
argument in the Compute
function just like the call from row 334, i presume would be the same right? because the T1 has already imported.
In addition, I have another side question on that, later on, I will try to perform head model on MRI volume which takes a long time per one subject. I was thinking to compute them parallelly in Matlab, for example, I made a script for running all subjects in a Parfor
loop, each physical core runs one subject, would this be feasible? My main concern is that since the head model estimation in Brainstorm is depending on open-source software like DUNEuro
for FEM, do you think it allows us to run in this way? Thanks, I am looking forward to hearing your expertise.