Hi!
This may be a basic question but...
How can I compute deep structures from individual anatomy, I mean, I have my subject's mri and I segmented it with CAT12, but I cannot see the aseg Atlas or any way to include deep structures,
thank in advances!
ps: Can I actually compute the subject's deep structure, I mean, not a generic atlas but his basal ganglia?
The ASEG labels are only generated from FreeSurfer, not from CAT.
Check the tutorials for info about the types of data obtained from the various programs:
https://neuroimage.usc.edu/brainstorm/Tutorials#Advanced_tutorials
ps: Can I actually compute the subject's deep structure, I mean, not a generic atlas but his basal ganglia?
What do you mean exactly?
Thank you very much!
I will try to segment the MRI with freesurfer to get the deep structures and I'll let you know how it goes.
