Hi Francois,
Our subjects have brain lesions (post-stroke) and FreeSurfer does not parcellate lesioned brains well. We could manually create scouts to use within brainstorm, but this is very tedious. We know how to parcellate lesioned brains with any volume atlas within SPM, so we thought we could use the Desikan-Killiany surface-based atlas in .nii format in SPM to correctly parcellate the lesioned brain. Is there another way get correctly parcellated brains, other than manually drawing scouts?
Thanks,
Adam