Hi Nithin,
How would you suggest i set my experiment up...should i sort the correct incorrect at the neuroscan level and save separately, do i average the conditions in brainstorm or should i average this from neuroscan?
The best possible option is for you to import the continuous Neuroscan file (.cnt) instead of the epoched file (.eeg) then to epoch and average in Brainstorm, as illustrated in the introduction tutorials on continuous recordings.
Inter-trial phase coherence, Transfer entropy and Granger causality
No current implementation in Brainstorm for the two first. The Granger causality is there but still at a very early stage of development.
If you are not very familiar with signal processing and programming, I would recommend you use only the tools that are correctly documented on the Tutorials page (http://neuroimage.usc.edu/brainstorm/Tutorials).
We will preparer a tutorial for the functional connectivity features later this year.
Today i tried to run the time frequency analysis but i was not able to run the analysis kept having error messages
Please copy-paste the full error message and describe what type of operation you were trying to run, and the type of input data.
Cheers,
Francois