Are you using the latest version of SPM12 (7771) and CAT12 (2170)?
I would need access to the data in order to identify the problem and try to fix it.
Could you please share:
- The original MRI after importing it into the database:
- Create a new subject
- Import the MRI, set the fiducials (if this is what you did before)
- Right-click on the MRI file in the database > File > Show in file explorer
- Zip the file, upload it somewhere and post the download link here (or send it to me as a private message on this forum if it is not de-identified)
- The result of the CAT12 segmentation:
- Right-click on the MRI you just imported > MRI segmentation > CAT12 > ... (as you did before)
- Immediately after you get the error message you reported above (do not close Brainstorm, as it would delete the CAT12 output):
- Zip the folder
$HOME/.brainstorm/tmp/cat12 - Upload it somewhere and share the download link.
Thanks