Before and after applying statistical threshold

[xiongruochu]

Hello,

I’m trying to apply statistical threshold (run process) to source (test against baseline).

But why the two results look so different?

1. before applying threshold, parameters: a=0.0001, bonferroni, control over dim(3 all checked)

2. after applying threshold, the setting parameters are the same with the above ones

The real-time setting of parameters in the first picture didn’t work?

I’ve tried different a (the results of a=0.0001, 0.001, and 0.1 are different)

[Raymundo.Cassani]

@xiongruochu

In this figure the slider Amplitude in the Surface tab is set to a value higher than 0%, so your results are thresholded. Hint: you can notices this is the case, as there are white bars in the colormap, these indicate the thresholds that are being used.