Inputs for "ConditionPath"

ttaleei · December 19, 2024, 3:35pm

Hello,
I would respectfully request guidance regarding the appropriate specification for this condition variable within the script "bst_get('StudyWithCondition', ConditionPath) %Find studies for a given condition path"). Are there particular standards or examples that could illustrate how this condition should be constructed? Furthermore, any documentation or references that elaborate on the expected format for "ConditionPath" would be invaluable.

In conclusion, I appreciate any assistance or insights that can be provided concerning the correct configuration of the condition parameter in the aforementioned script. Such guidance would be instrumental in ensuring the efficacy of the function in retrieving relevant studies.

tmedani · December 19, 2024, 8:33pm

Hi @ttaleei

You can find detailed information here:

github.com

brainstorm-tools/brainstorm3/blob/f179264ee08c8c06909d097f3b6b63c2b873bd25/toolbox/core/bst_get.m#L784


      
                      argout2   = [];

                  end

                  % Add inter-subject node, if needed

                  if isInterSubject

                      [sInterStudy, iInterStudy] = bst_get('AnalysisInterStudy');

                      argout1 = [argout1, sInterStudy];

                      argout2   = [argout2,   iInterStudy];

                  end

                        

                  

          %% ==== STUDY WITH CONDITION PATH ====

              % USAGE:  [sStudies, iStudies] = bst_get('StudyWithCondition', ConditionPath)

              %

              % INPUT: ConditionPath

              %    - 'SubjectName/conditionName'  : Target condition for the specified subject

              %    - 'SubjectName/@intra'         : Intra-subject condition for the subject

              %    - 'SubjectName/@default_study' : Default condition for the subject (where the subject's shared files are stored)

              %    - '*/conditionName'            : Target condition for all the subjects

              %    - '@inter'                     : Inter-subject condition

              %    - '@default_study'             : Protocol's default condition (where the protocol's shared files are stored)

Once you have your protocol loaded in Brainstorm you can access to all the information by specifying the path you want in the function.

Best,

ttaleei · December 20, 2024, 10:58am

I would like to express my gratitude for your prompt response. I have successfully created the protocol; however, I am uncertain about the conditions that need to be established. Specifically, I would like to know if it is necessary for me to upload any data at this stage. It is important to mention that I currently possess no data, and I aim to extract this preliminary information through brainstorming, after which I will generate the data myself in MATLAB.
The protocol for brainstorm is as follows.

Thank you for your assistance in this matter.

Sincerely,

tmedani · December 20, 2024, 8:35pm

Thanks for the reply. It is still unclear to me what you would like to do.
Can you please explain what you want to do with this function?
Do you have a specific need to export the data by condition?