@Palaccivatbfc
There is indeed something to fix in this tutorial. I added a warning at the beginning of the MEM section, and moved it at the end of the page.
The BEst toolbox is maintained outside of Brainstorm by external contributors. We are currently waiting for updates from their end. I'm sorry I can't help you much with your questions related with the MEM method.
@cgrova @aliobaibk
Could you please give us a timeline for the maintenance of the BEst toolbox?
This includes:
- Simplify the BEst distribution process by making it a Brainstorm plugin:
https://neuroimage.usc.edu/brainstorm/Tutorials/Plugins - Address the issues reported on the forum, for example:
Can not compute sources using MEM
Issue trying to compute surces wiht MEM with EEG recordings, - Fix the EEG/Epilepsy tutorial:
https://neuroimage.usc.edu/brainstorm/Tutorials/Epilepsy#Source_analysis:_MEM_inverse_solution - Fix the BEst tutorial:
https://neuroimage.usc.edu/brainstorm/Tutorials/TutBEst - Address the questions about the compilation of your functions together with Brainstorm:
BEst toolbox in brainstorm compiled version - Optionally (needed for compiling with Brainstorm): Remove the dependencies to Matlab toolboxes other than the Signal Processing Tb (exemple: find an alternative to fminunc)
- Standardize the way your method is called: relying on detecting a file named "baseline" in a folder is not a robust solution, instead please consider using the Process2 tab, with the baseline on one side and the target data on the other (similarly to the Baseline normalization or Epileptogenicity processes)
- Define one person responsible for the maintenance of this toolbox
Thanks
Francois