Hi all - Just a heads up.
The toolbox zeros the diagonals while plotting however, the original matrix in db retains the diagonals.
Need to explicitly mention this to user to avoid errors.
Hi @nmakaram,
Zeroing the diagonal elements has been added as option in:
https://github.com/brainstorm-tools/brainstorm3/tree/232af6a93fcd0d829c69de0642003ef463ebb8ea
Additional information can be found in Brainstorm connectivity tutorial:
https://neuroimage.usc.edu/brainstorm/Tutorials/Connectivity#Result_visualization
The diagonal elements are forced to zero so that to display the off-diagonal values clearly by not force scaling the colormap to 1.
To have this option, just update Brainstorm
Best,
Raymundo