Cite Brainstorm in your publications
Once you are done with your analyses performed with Brainstorm, proper citation would be greatly appreciated; thank you!
How to cite...
... Brainstorm
Data analysis was performed with Brainstorm (Tadel et al. 2011), which is documented and freely available for download online under the GNU general public license (http://neuroimage.usc.edu/brainstorm).
- Group analysis processing pipeline: Tadel et al. 2019
- Resting state processing pipeline: Niso et al. 2019
... forward models
- Spherical head model: Mosher et al. 1999
- Overlapping spheres: Huang et al., 1999
- OpenMEEG BEM: Gramfort et al., 2010 / Kybic et al., 2005
... inverse methods
Tikhonov-regularized minimum-norm: Baillet et al., 2001.
Default value for Tikhonov parameter is λ = 10% of maximum singular value of the lead field.
... the default anatomy
Colin27: MNI brain with a 1mm resolution. More info....
... FreeSurfer
Whether you are using FreeSurfer for the T1 segmentation, the cortical atlases or the FSAverage subject default: please register on their website (registration page) and cite the appropriate references.
... statistical analysis using non-parametric permutation tests
- Permutation tests: Pantazis et al., 2005.
... the tutorial datasets
- TODO
Publications
The previous citations refer to the following publications. Further reading is available in the Publications section.
Baillet S, Mosher JC, Leahy RM (2001)
Electromagnetic Brain Mapping
IEEE Signal Processing Magazine, 18(6): 14-30, Nov 2001Gramfort A, Papadopoulo T, Olivi E, Clerc M (2010)
OpenMEEG: opensource software for quasistatic bioelectromagnetics
BioMedical Engineering OnLine 45:9, 2010Huang MX, Mosher JC, Leahy RM (1999)
A sensor-weighted overlapping-sphere head model and exhaustive head model comparison for MEG
Phys Med Biol, 44:423-440Kybic J, Clerc M, Abboud T, Faugeras O, Keriven R, Papadopoulo T (2005)
A common formalism for the integral formulations of the forward EEG problem
IEEE Transactions on Medical Imaging, 24:12-28, 2005. [pdf]Leahy RM, Mosher JC, Spencer ME, Huang MX, Lewine JD (1998)
A study of dipole localization accuracy for MEG and EEG using a human skull phantom
Electroencephalography and Clinical Neurophysiology, 107(2):159-73Mosher, Leahy RM, Lewis PS (1999)
EEG and MEG: Forward solutions for inverse methods
IEEE Trans Biomedical Eng, 46(3):245-259, Mar 1999Niso G, Tadel F, Bock E, Cousineau M, Santos A, Baillet S (2019)
Brainstorm Pipeline Analysis of Resting-State Data from the Open MEG Archive
Frontiers in Neuroscience, Mar 2019Pantazis D, Nichols TE, Baillet S, Leahy RM (2005)
A Comparison of Random Field Theory and Permutation Methods for the Statistical Analysis of MEG data
Neuroimage, 25(2):383-394, 2005Tadel F, Baillet S, Mosher JC, Pantazis D, Leahy RM (2011)
Brainstorm: A User-Friendly Application for MEG/EEG Analysis
Computational Intelligence and Neuroscience, vol. 2011, Article ID 879716, 13 pages, 2011. doi:10.1155/2011/879716Tadel F, Bock E, Niso G, Mosher JC, Cousineau M, Pantazis D, Leahy RM, Baillet S (2019)
MEG/EEG Group Analysis With Brainstorm
Frontiers in Neuroscience, Feb 2019