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Introduction to the Brainstorm time-frequency and functional connectivity tools, as part of the 4-day workshop "Scale-free dynamics and networks in neurosciences", organized by Philippe Ciuciu and Jean-Marc Lina on October 21-24, 2013.<<BR>>Visit the [[http://www.crm.umontreal.ca/2013/Neuro13/index_e.php|conference website]]. | Introduction to the Brainstorm time-frequency and functional connectivity tools, as part of the 4-day workshop "Scale-free dynamics and networks in neurosciences" on October 21-24, 2013.<<BR>>Visit the [[http://www.crm.umontreal.ca/2013/Neuro13/index_e.php|conference website]]. |
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'''Where:''' Florence (Italy), Firenze Fiera Congress & Exhibition Center<<BR>>PDA building (Palazzo Degli Affari) - SALA ADUA 1 - Primo Piano (First Floor) - [[http://www.sprweb.org/meeting/2013/2013_SPR_Floor_Diagrams-Final.pdf|Download map]]<<BR>>Registration opens at 7:30am at PIAZZA ADUA (main entrance of the Congress Center) | '''Where:''' Centre de recherches mathématiques, Université de Montréal, Pavillon André-Aisenstadt<<BR>>2920, Chemin de la tour, 5th floor<<BR>>Map of the campus: [[http://www.crm.umontreal.ca/coord/CampusUdeM.pdf|download]]. |
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'''When:''' October 1st & 2nd, 8:15am-6pm | '''When:''' October 24, 14:00-18:00 |
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'''Organizers & instructors : '''Stephan Moratti (UPM, Madrid), Sylvain Baillet, François Tadel and Elizabeth Bock (MNI/McGill, Montreal) | '''Organizers & instructors : '''Philippe Ciuciu (CEA/Neurospin & INRIA), Jean-Marc Lina (ETS & CRM) |
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'''Target audience: '''Neuroscientists, psychologists, clinicians, engineers, etc. using MEG or EEG as advanced research tools. Students, post-docs, staff, faculty interested in learning a new academic software tool for MEG and EEG data analysis, with an emphasis on source imaging, spectral decompositions and functional connectivity metrics. '''Objective: '''The aim of this two-days workshop is to train psychophysiologists/ neuroscientists with advanced EEG and MEG data analysis methods such as cortical source estimation, spectral decomposition, functional connectivity analysis and general linear models for statistical inference in EEG and MEG sensor and source space. The importance of clear, graphical representations of data and results for publication purposes will be also highlighted. |
'''Instructors : '''François Tadel, Elizabeth Bock (MNI/McGill, Montreal) |
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'''7:30-8:15: Registration''' | '''14:00'''-'''14:30''': '''Brainstorm overview''' |
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* Registration opens at 7:30am at PIAZZA ADUA (main entrance of the Congress Center) * Please note that the PDA building '''will not be open until 8am''' for attendees access '''08:15-9:00:''' '''Continental breakfast and laptop clinic''' * Bring your laptop if you are not sure you were successful in installing the material for the training '''9:00-10:00''': '''Brainstorm overview''' * Introduction |
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'''10:00-10:45: Hands-on training begins''' | '''14:30-15:30: Importing data in Brainstorm''' |
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* Reviewing continuous recordings * Epoching and averaging * Observation of a typical somato-sensory evoked response * Head modeling, cortical source reconstruction * Definition of ROIs |
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'''10:45-11:00: Coffee break<<BR>> ''' | '''15:30-15'''''':45: Coffee break''' |
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'''11:00-12:40: Hands-on training<<BR>> ''' | '''15:45-17:30: ''''''Advanced topics''' |
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* Co-registration MEG/MRI * Reviewing continuous recordings * Artifact detection and correction * Filtering and epoching * Averaging, observation of a typical somato-sensory evoked response * Head modeling, cortical source reconstruction __'''12:40-13:30: Lunch break'''__ '''13:30-15:00: Hands-on training resumes '''(coffee & refreshments served) * Definition of ROIs, tracking the processing of the sensory information millisecond by millisecond at the cortex level |
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'''15:00-15'''''':30: Coffee break''' '''15:30-18:00: ''''''Advanced topics and open discussion<<BR>>''' * Group analysis and statistics * Advanced scripting interface * Other topics can be discussed depending on the audience specific requests == Workshop program: Day 2 (SPM8) == <<HTML(<FONT color=red>)>>'''Requirements'''<<HTML(</FONT>)>> Please go to http://www.fil.ion.ucl.ac.uk/spm/software/spm8/ and download and install the current SPM8 version. You can find all installation instructions on that website.<<BR>><<BR>> '''08:15-9:00:''' '''Continental breakfast and laptop clinic''' * Bring your laptop if you are not sure you were successful in installing the material for the training '''9:30-10:15: SPM8 overview''' * Introduction * What can SPM8 do? * Why using a formerly fMRI toolbox with MEG/ EEG data? '''10:15-11:30: Hands-on training''' * Conversion of data * Epochs * Artifacts * Filters * Epoch averaging * Visualization of data __'''11:30-12:30: Lunch break (on your own)'''__ '''12:30-2:15: Hand-on training''' * Statistics in sensor space * Cropping data * How to get volumes from sensors * Specify a General Linear Model (GLM) and its contrasts * Results * Cortical source reconstruction of event related fields '''2:15-2:30: Coffee break <<BR>>''' '''2:30-3:30: Hands-on training''' * Time frequency analysis * Down-sampling * Spectral decomposition * Results * Cortical source reconstruction in the time frequency domain * Induced responses * Create volumes * Specify your GLM * Results '''3:30-4:30: Open discussion''' * Free data play and SPM8 exploration . <<EmbedContent(http://neuroimage.usc.edu/brainstorm3_register/workshop.js)>> . <<HTML(<!-- div id="bst_table" style=""><FORM METHOD="post" ACTION="http://neuroimage.usc.edu/brainstorm3_register/workshop_reg.php" name="form" onSubmit="return validateForm(this);"><TABLE><TR><TD align=right>First name * </TD> <TD><INPUT type="text" name="firstname" size=40></TD></TR> <TR><TD align=right>Last name * </TD> <TD><INPUT type="text" name="lastname" size=40></TD></TR> <TR><TD align=right>Title / Occupation * </TD> <TD><INPUT type="text" name="title" size=40></TD></TR> <TR><TD align=right>Institution * </TD> <TD><INPUT type="text" name="institution" size=40></TD></TR> <TR><TD align=right>City * </TD> <TD><INPUT type="text" name="city" size=40></TD></TR> <TR><TD align=right>Email address * </TD> <TD><INPUT type="text" name="email" size=40></TD></TR> <TR><TD align=right>Phone </TD> <TD><INPUT type="text" name="phone" size=40></TD></TR></TABLE> <BR> <BR> <INPUT type="submit" value="Register now!" style="width:200px"> <A HREF="WorkshopFlorence2013Reg">View list of registered participants </A> <BR><BR><BR><INPUT type="hidden" name="eventname" value="Florence2013"> </FORM> </div -->)>> |
'''17:30-18:00: Questions and discussion''' |
Montreal, Canada: October 24, 2013
Introduction to the Brainstorm time-frequency and functional connectivity tools, as part of the 4-day workshop "Scale-free dynamics and networks in neurosciences" on October 21-24, 2013.
Visit the conference website.
General information
Where: Centre de recherches mathématiques, Université de Montréal, Pavillon André-Aisenstadt
2920, Chemin de la tour, 5th floor
Map of the campus: download.
When: October 24, 14:00-18:00
Organizers & instructors : Philippe Ciuciu (CEA/Neurospin & INRIA), Jean-Marc Lina (ETS & CRM)
Instructors : François Tadel, Elizabeth Bock (MNI/McGill, Montreal)
Workshop program: Day 1 (Brainstorm)
Requirements
The participants are required to bring a laptop (an external mouse will add to your comfort). In order to make the session as efficient as possible, we ask all the attendees to download, install and test the software and sample dataset on their laptops prior to the workshop. Please read carfully the following instructions:
How to prepare your laptop for the training
14:00-14:30: Brainstorm overview
- Software architecture
- Typical data workflow
14:30-15:30: Importing data in Brainstorm
- Database explorer
- Importing MRI volumes, surfaces and atlases
- Introduction to anatomical atlases
- Reviewing continuous recordings
- Epoching and averaging
- Observation of a typical somato-sensory evoked response
- Head modeling, cortical source reconstruction
- Definition of ROIs
15:30-15:45: Coffee break
15:45-17:30: Advanced topics
- Frequency and time-frequency analysis
- Functional connectivity
17:30-18:00: Questions and discussion