Hi All,
I got this error when I try to compute the head model.
The link is the zip file including all all the anatomy information. (https://mcgill-my.sharepoint.com/:u:/g/personal/siyu_long_mail_mcgill_ca/EQ41QBGn6RlOgqZGkKu6rTkBtdni2kwVK8qxwQPn2Me3Cg?e=JLmhqm).
Do you have any solution?
** Error: OpenMEEG call: om_assemble -HM
** "/home/rkarakis/.brainstorm/tmp/openmeeg_231010_210331/openmeeg.geom"
** "/home/rkarakis/.brainstorm/tmp/openmeeg_231010_210331/openmeeg.cond"
** "/home/rkarakis/.brainstorm/tmp/openmeeg_231010_210331/openmeeg_hm.mat"
** OpenMEEG error #1:
** ./om_assemble version 2.4.1 compiled at Aug 29 2018 08:19:44 using OpenMP
** Executing using 6 threads.
**
** | ------ ./om_assemble
** | -HM
** | /home/rkarakis/.brainstorm/tmp/openmeeg_231010_210331/openmeeg.geom
** | /home/rkarakis/.brainstorm/tmp/openmeeg_231010_210331/openmeeg.cond
** | /home/rkarakis/.brainstorm/tmp/openmeeg_231010_210331/openmeeg_hm.mat
** | -----------------------
** (DEPRECATED) Please consider updating your geometry file to the new format 1.1 (see data/README.rst): /home/rkarakis/.brainstorm/tmp/openmeeg_231010_210331/openmeeg.geom
** This geometry is a NESTED geometry.
** Info:: Mesh name/ID : 1
** # vertices : 1922
** # triangles : 3840
** Euler characteristic : 2
** Min Area : 8.76184e-06
** Max Area : 8.50929e-05
** Info:: Mesh name/ID : 2
** # vertices : 1922
** # triangles : 3840
** Euler characteristic : 2
** Min Area : 8.93419e-06
** Max Area : 8.61097e-05
** Info:: Mesh name/ID : 3
** # vertices : 1922
** # triangles : 3840
** Euler characteristic : 2
** Min Area : 8.21848e-06
** Max Area : 6.5237e-05
** Info:: Domain name : Scalp
** Conductivity : 1
** Composed by interfaces : +1 -3
** Interface "1"= { mesh "1" }
** Interface "3"= { mesh "3"(outermost) }
** Info:: Domain name : Skull
** Conductivity : 0.0125
** Composed by interfaces : +2 -1
** Interface "2"= { mesh "2" }
** Interface "1"= { mesh "1" }
** Info:: Domain name : Brain
** Conductivity : 1
** Composed by interfaces : -2
** Interface "2"= { mesh "2" }
** Info:: Domain name : Air
** Conductivity : 0
** Composed by interfaces : +3
** Considered as the outermost domain.
** Interface "3"= { mesh "3"(outermost) }
** !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
** !!!!!!!!!!! WARNING !!!!!!!!!!!
** !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
** 2 meshes are intersecting !
** Info:: Mesh name/ID : 1
** # vertices : 1922
** # triangles : 3840
** Euler characteristic : 2
** Min Area : 8.76184e-06
** Max Area : 8.50929e-05
** Info:: Mesh name/ID : 3
** # vertices : 1922
** # triangles : 3840
** Euler characteristic : 2
** Min Area : 8.21848e-06
** Max Area : 6.5237e-05
** !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
** !!!!!!!!!!! WARNING !!!!!!!!!!!
** !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
** 2 meshes are intersecting !
** Info:: Mesh name/ID : 2
** # vertices : 1922
** # triangles : 3840
** Euler characteristic : 2
** Min Area : 8.93419e-06
** Max Area : 8.61097e-05
** Info:: Mesh name/ID : 3
** # vertices : 1922
** # triangles : 3840
** Euler characteristic : 2
** Min Area : 8.21848e-06
** Max Area : 6.5237e-05
**
** For help with OpenMEEG errors, please refer to the online tutorial:
** https://neuroimage.usc.edu/brainstorm/Tutorials/TutBem#Errors
Thank you!
Siyu
