Surface not aligned to T1 after importing to BST

[tmedani]

There is probably some information missing when importing only these two files.

Can you check this

Incorrect T1 orientation when loading infant freesurfer output

Thank you for sharing an example file. However, what you sent is not a T1.mgz as created by the recon-all command. Therefore, you can't use the default import procedure that is specifically developed for the import of the recon-all output. What you did is: convert a .nii.gz file to a .mgz with mri_convert, then import the .mgz in Brainstorm. In this configuration: simply import the .nii.gz file in the Brainstorm database. If you nevertheless want to import this .mgz file in the Brainstorm d…

you may need to accept the transformation when you are importing the data.