Digimouse: Creation of Atlas

• Overview | Data Acquisition | Registration | Creation of Atlas] | Simulations | Download

The Coregistered Data with the Atlas

• Matrix size: 380 x 992 x 208
• Voxel size: 0.1mm x 0.1mm x 0.1mm
• Size: ~77MB

• The data is in ANALYZE format which can be viewed using BrainSuite.

• PET Data

• CT Data

• Cryosection Data

• Atlas Data

Java Viewer which shows 3D orthogonal views of registered PET, CT, Cryosections and Atlas (You need to enable Java support in your browser in order to run this applet)

The Raw Data

Tesselated Atlas

• .mat file which can be loaded in MATLAB
• includes .txt file which has the assignments of the tetrahedrons to each organ
• 306,773 elements and 58,244 nodes (16,164 surface nodes and 42,080 internal nodes)