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| = The Brainstorm Team = == Richard M. Leahy, PhD == ''Signal & Image Processing Institute<<BR>>University of Southern California, Los Angeles, CA USA'' |
= The Brainstorm team = == Principal investigators == <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=sylvainbaillet.jpg" width=90 height=90/></div>)>> |
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| Dr. Leahy's research interests lie in the application of signal and image processing theory to the formation and analysis of biomedical images. His research group is currently involved in the development and analysis of computational methods for formation of positron emission tomography (PET) images with applications in clinical oncology and gene expression imaging in small animals. | <<HTML(<B>)>>[[AboutUs/SylvainBaillet|Sylvain Baillet, PhD]]<<HTML(</B>)>> |
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| For the past 15 years, Dr. Leahy has been involved in the development of inverse method for spatio-temporal imaging of neural activity from measurements of magnetoencephalographic (MEG) and electroencephalographic (EEG) data. | ''Professor, Director MEG Research''<<BR>>Acting Director, ''McConnell Brain Imaging Centre, Montreal Neurological Institute<<BR>>McGill University, Montreal, QC Canada'' |
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| Dr. Leahy has also had a long research interest in the analysis of anatomical imagery, and specifically in the automated segmentation and labelling of neuroanatomical images and in extracting surface representations of the cerebral cortex from volumetric data. His work is supported by the National Cancer Institute, the National Institute of Mental Health and the National Center for Research Resources. | <<HTML(<div style="clear: left;"></div>)>> |
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| == John C. Mosher, PhD == ''Epilepsy Center, Cleveland Clinic 'Neurological Institute'<<BR>>Cleveland, OH USA'' |
<<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=richardleahy.jpg" width=90 height=90/></div>)>> |
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| Dr. Mosher received his Bachelors in Electrical Engineering with Highest Honors from the Georgia Institute of Technology in 1983. From 1981 - 1982 he was an exchange scholar student with the Eidgenoessische Technische Hochschule Zuerich, Switzerland. From 1979 - 1983 he was also a Cooperative Education student with Hughes Aircraft Company in Fullerton, California. From 1983 - 1993, he worked at TRW in Los Angeles, California, as a scientist and senior scientist researching signal analysis procedures for electromagnetic pulse effects on aircraft. While at TRW, he received his M.S. (1985) and Ph.D. (1993) in Electrical Engineering from the Signal & Image Processing Institute of the University of Southern California. Upon graduation in 1993, he accepted a staff position at the Los Alamos National Laboratory, Los Alamos, New Mexico. In May 2008, Dr. Mosher joined the Physician Staff in the Epilepsy Center to head its new magnetoencephalography (MEG) research program. | <<HTML(<B>)>>[[AboutUs/RichardLeahy|Richard M. Leahy, PhD]]<<HTML(</B>)>> |
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| Since 1994, Dr. Mosher has been without interruption a Principal Investigator or Co-Investigator on competitive grants from the National Institutes of Health, as well as several competitive Laboratory Directed Research and Development grants. In his research role, he has served as a formal Mentor of Laboratory-employed students and post-docs, and as an informal mentor of his collaborator's students and post-docs. Working closely with these students and his collaborators, he has continuously published in his field of biomedical research since 1990. | ''Signal & Image Processing Institute, Director<<BR>>University of Southern California, Los Angeles, CA USA'' |
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| As of 2011, Dr. Mosher has over 2,400 citations to over 100 papers appearing in the ISI Citation database. His landmark paper in 1992 remains today one of the most cited original research papers in magnetoencephalography, with over 650 total citations of the original article. Additionally, this 1992 paper was included in the landmark 1993 review paper, “Magnetoencephalography — theory, instrumentation, and applications to noninvasive studies of the working human brain,” M Hämäläinen, R Hari, RJ Ilmoniemi, J Knuutila, …, ''Reviews of Modern Physics'', which itself now has over 1,800 citations, making Dr. Mosher’s notation and approach one of the standards in MEG signal processing. | <<HTML(<div style="clear: left;"></div>)>> |
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| == Sylvain Baillet, PhD == ''!McConnell Brain Imaging Centre, Montreal Neurological Institute<<BR>>!McGill University, Montreal, QC Canada'' |
<<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=johnmosher.jpg" width=90 height=90/></div>)>> |
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| Associate Professor, Director MEG Research - [[http://www.bic.mni.mcgill.ca/ResearchLabsNeuroSPEED/HomePage|Dynamic Neuroimaging Lab (neuroSPEED)]] | <<HTML(<B>)>>[[AboutUs/JohnMosher|John C. Mosher, PhD]]<<HTML(</B>)>> |
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| Sylvain Baillet is a physicist with research interests in methodological developments for functional and structural brain imaging and their application to clinical and cognitive Neuroscience. Although his primary expertise is with MEG (magnetoencephalography, http://www.bic.mni.mcgill.ca/Facilities/MEG) imaging, he also contributed new techniques for MRI image segmentation and inter-subject registration. He has also initiated new image analysis techniques for the early prediction of infarct growth in stroke patients, using diffusion-weighted MR sequences. His current research projects with MEG include real-time therapeutic imaging, the evaluation of resting-state brain activity and connectivity in the healthy and diseased brain, and the development of original data mining and visualization techniques for time-resolved brain image series. He has also great interest in disseminating his research through academic software: he is a founding developer of the Brainstorm open-source software project (http://neuroimage.usc.edu/brainstorm) for MEG and EEG imaging with MRI integration.Bio info: Sylvain Baillet graduated from the Department of Applied Physics at the Ecole Normale Supérieure de Cachan (France) and completed his Ph.D. training in Physics at the University of Paris: Orsay, in 1998. He was with the University of Southern California until 2000, before joining the Centre National de la Recherche Scientifique (CNRS, France) as a tenured Research Scientist. He became the head of the Brain Imaging group at the Cognitive Neuroscience and Brain Imaging CNRS Laboratory in 2005, at the Hôpital de La Salpetriere in Paris. In 2008, he took a position as Associate Professor of Neurology & Biophysics at the Medical of Wisconsin and became the founding Scientific Director of the MEG Program at Froedtert Hospital, in Milwaukee (USA). In 2011, he joined the Montreal Neurological Institute at !McGill University as an Associate Professor of Neurology and Neurosurgery and as the founding Director of Research of the MNI’s newly established MEG Program. | ''MEG research, Director<<BR>>Epilepsy Center<<BR>>Cleveland Clinic Neurological Institute, Cleveland, OH USA'' |
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| Overall, he has co-authored about 60 articles and book chapters and 120 communications in international conferences. He is also co-inventor of 3 international patents. | <<HTML(<div style="clear: left;"></div>)>> |
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| == Dimitrios Pantazis, PhD == ''MEG Lab, !McGovern Institute for Brain Research<<BR>>Massachusetts Institute of Technology, Cambridge, MA USA'' |
== Software engineers == <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=francoistadel2.jpg" width=90 height=90/></div>)>> |
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| Dimitrios Pantazis, who joined the !McGovern Institute in 2010, oversees the operation of the recently established [[http://mcgovern.mit.edu/technology/meg-lab|Magnetoencephalography (MEG) Laboratory]]within the [[http://mcgovern.mit.edu/technology/martinos-imaging-center|Martinos Imaging Center at MIT]]. Before moving to MIT, he was a Research Assistant Professor at the University of Southern California. His research interest is in the application of signal processing theory to the analysis of neuroimaging data, including MEG, EEG and MRI. He has collaborated with many neuroscience researchers and has published over 70 articles in scientific journals and conference proceedings. | <<HTML(<B>)>>[[AboutUs/FrancoisTadel|François Tadel, MSc]]<<HTML(</B>)>> |
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| == François Tadel, MSc == ''McConnell Brain Imaging Centre, Montreal Neurological Institute<<BR>>!McGill University, Montreal, QC Canada'' |
''Grenoble Institut des Neurosciences / Inserm<<BR>>Université Grenoble Alpes, France'' <<HTML(<div style="clear: left;"></div>)>> <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=martin.jpg" width=90 height=90/></div>)>> <<HTML(<B>)>>[[AboutUs/MartinCousineau|Martin Cousineau, MSc]]<<HTML(</B>)>> ''McConnell Brain Imaging Centre, Montreal Neurological Institute<<BR>>McGill University, Montreal, QC Canada'' <<HTML(<div style="clear: left;"></div>)>> == Key collaborators == <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=bethbock.jpg" width=90 height=90/></div>)>> <<HTML(<B>)>>[[AboutUs/ElizabethBock|Elizabeth Bock, MSc]]<<HTML(</B>)>> ''McConnell Brain Imaging Centre, Montreal Neurological Institute<<BR>>McGill University, Montreal, QC Canada'' <<HTML(<div style="clear: left;"></div>)>> <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=guiomar.jpg" width=90 height=90/></div>)>> <<HTML(<B>)>> [[https://guiomarniso.wordpress.com/|Julia Guiomar Niso Galán, PhD]] <<HTML(</B>)>> ''Center for Biomedical Technology<<BR>>Universidad Politécnica de Madrid, Spain'' <<HTML(<div style="clear: left;"></div>)>> <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=dimitriospantazis.jpg" width=90 height=90/></div>)>> <<HTML(<B>)>>[[AboutUs/DimitriosPantazis|Dimitrios Pantazis, PhD]]<<HTML(</B>)>> ''MEG Lab, McGovern Institute for Brain Research<<BR>>Massachusetts Institute of Technology, Cambridge, MA USA'' <<HTML(<div style="clear: left;"></div>)>> <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=alexgramfort.jpg" width=90 height=90/></div>)>> <<HTML(<B>)>>[[http://alexandre.gramfort.net/|Alexandre Gramfort, PhD]]<<HTML(</B>)>> ''Telecom ParisTech CNRS LTCI, France<<BR>>CEA Neurospin, France'' <<HTML(<div style="clear: left;"></div>)>> <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=anand.jpg" width=90 height=90/></div>)>> <<HTML(<B>)>>[[http://ee.usc.edu/faculty_staff/research-faculty/joshi.htm|Anand Joshi, PhD]]<<HTML(</B>)>> ''Signal & Image Processing Institute, Research Assistant<<BR>>University of Southern California, Los Angeles, CA USA'' <<HTML(<div style="clear: left;"></div>)>> <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=hossein.png" width=90 height=90/></div>)>> <<HTML(<B>)>>Hossein Shahabi<<HTML(</B>)>> ''Signal & Image Processing Institute, PhD student<<BR>>University of Southern California, Los Angeles, CA USA'' <<HTML(<div style="clear: left;"></div>)>> <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=estherflorin.jpg" width=90 height=90/></div>)>> <<HTML(<B>)>>[[https://sites.google.com/site/estherflorinneuro/home|Esther Florin, PhD]]<<HTML(</B>)>> ''Lichtenberg Assistant Professor for Systems Neuroscience<<BR>>Institute for Clinical Neuroscience and Medical Psychology<<BR>>Heinrich-Heine University Düsseldorf, Germany'' <<HTML(<div style="clear: left;"></div>)>> <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=reyramirez.jpg" width=90 height=90/></div>)>> <<HTML(<B>)>>[[http://ilabs.washington.edu/research-scientists/bio/i-labs-rey-ramirez-phd|Rey R. Ramirez, PhD]]<<HTML(</B>)>> ''I-LABS MEG Brain Imaging Center<<BR>>University of Washington, Seattle, WA USA'' <<HTML(<div style="clear: left;"></div>)>> <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=anneso.jpg" width=90 height=90/></div>)>> <<HTML(<B>)>>[[http://www.neurotrack.fr/contact/|Anne-Sophie Dubarry]]<<HTML(</B>)>> ''Laboratoire Parole et Langage <<BR>>Aix-Marseille University'' <<HTML(<div style="clear: left;"></div>)>> == MEG@McGill == <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=soheila.jpg" width=90 height=90/></div>)>> <<HTML(<B>)>>Soheila Samiee<<HTML(</B>)>>, PhD student ''McConnell Brain Imaging Centre, Montreal Neurological Institute<<BR>>McGill University, Montreal, QC Canada'' <<HTML(<div style="clear: left;"></div>)>> <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=peter.jpg" width=90 height=90/></div>)>> <<HTML(<B>)>>Peter Donhauser<<HTML(</B>)>>, PhD student ''McConnell Brain Imaging Centre, Montreal Neurological Institute<<BR>>McGill University, Montreal, QC Canada'' <<HTML(<div style="clear: left;"></div>)>> <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=jtm.jpg" width=90 height=90/></div>)>> <<HTML(<B>)>>Jeremy Moreau<<HTML(</B>)>>, PhD student ''Applications of MEG to presurgical evaluation''<<BR>>''in medically refractory paediatric epilepsy patients '' <<HTML(<div style="clear: left;"></div>)>> <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=konstantinos.jpg" width=90 height=90/></div>)>> <<HTML(<B>)>>Konstantinos Nasiotis<<HTML(</B>)>>, PhD student ''McConnell Brain Imaging Centre, Montreal Neurological Institute<<BR>>McGill University, Montreal, QC Canada'' <<HTML(<div style="clear: left;"></div>)>> == Former collaborators == <<HTML(<TABLE><TR><TD>)>> <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=sergul.jpg" width=90 height=90/></div><B>Sergul Aydore, PhD</B><div style="clear: left;"></div>)>> <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=syed.jpg" width=90 height=90/></div><B>Syed Ashrafulla, PhD</B><div style="clear: left;"></div>)>> <<HTML(</TD><TD>)>> <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=seb.jpg" width=90 height=90/></div><B>Sebastien Dery</B><div style="clear: left;"></div>)>> <<HTML(<div style="float: left; clear: left; margin: 0px 15px 15px 25px;"><img src="/brainstorm/AboutUs?action=AttachFile&do=get&target=arnaud.jpg" width=90 height=90/></div><B>Arnaud Gloaguen</B><div style="clear: left;"></div>)>> <<HTML(</TD></TR></TABLE>)>> == Awesome contributors == '''MGH, Boston'''<<BR>>Matti Hamalainen, Sheraz Khan '''MIT, Boston'''<<BR>>Seyed-Mahdi Khaligh-Razavi '''USC, Los Angeles'''<<BR>>Felix Darvas, Belma Dogdas, John Ermer, Esen Kucukaltun-Yildirim, Alexei Ossadtchi '''UCSF, San Francisco'''<<BR>>Darren Weber '''CNRS, Paris'''<<BR>>Antoine Ducorps, Guillaume Dumas, Line Garnero, Karim N'Diaye, Denis Schwartz, Lydia Yahia-Cherif '''Neurospin / CEA / Inserm, Paris'''<<BR>>Ghislaine Dehaene-Lambertz, Lucie Charles, Lauri Parkkonen '''CERMEP / Inserm, Lyon'''<<BR>>Claude Delpuech '''Universite Aix-Marseille, France'''<<BR>>Svetlana Pinet, Julien Lefevre '''National Chiao Tung University, Taiwan'''<<BR>>Hui-Ling Chan == MNE software == MNE is a software suite for MEG / EEG processing, developed at the Martinos Center for Biomedical Imaging, MGH. It contains many command line functions written in C and compiled for Linux and MacOSX, interactive tools for reviewing the recordings and the source estimates, and Matlab and Python code to interact with a wide variety of other environments. Brainstorm and MNE are developed with the support of a common NIH grant (NIH/NCRR 1R01EB009048-01) [[http://www.martinos.org/mne/|MNE website]] == Community websites == * [[http://megcommunity.org|MEG Community wiki]] * [[http://www.nitrc.org|NITRC]]: The source for Neuroimaging Tools and Resources * [[http://www.hindawi.com/journals/cin/2011/si.ebm/|"Academic Software Applications for Electromagnetic Brain Mapping Using MEG and EEG"]]:<<BR>>Special issue of the journal Computation Intelligence and Neuroscience <<BR>><<BR>><<BR>> |
The Brainstorm team
Principal investigators
Professor, Director MEG Research
Acting Director, McConnell Brain Imaging Centre, Montreal Neurological Institute
McGill University, Montreal, QC Canada
Signal & Image Processing Institute, Director
University of Southern California, Los Angeles, CA USA
MEG research, Director
Epilepsy Center
Cleveland Clinic Neurological Institute, Cleveland, OH USA
Software engineers
Grenoble Institut des Neurosciences / Inserm
Université Grenoble Alpes, France
McConnell Brain Imaging Centre, Montreal Neurological Institute
McGill University, Montreal, QC Canada
Key collaborators
McConnell Brain Imaging Centre, Montreal Neurological Institute
McGill University, Montreal, QC Canada
Center for Biomedical Technology
Universidad Politécnica de Madrid, Spain
MEG Lab, McGovern Institute for Brain Research
Massachusetts Institute of Technology, Cambridge, MA USA
Telecom ParisTech CNRS LTCI, France
CEA Neurospin, France
Signal & Image Processing Institute, Research Assistant
University of Southern California, Los Angeles, CA USA
Hossein Shahabi
Signal & Image Processing Institute, PhD student
University of Southern California, Los Angeles, CA USA
Lichtenberg Assistant Professor for Systems Neuroscience
Institute for Clinical Neuroscience and Medical Psychology
Heinrich-Heine University Düsseldorf, Germany
I-LABS MEG Brain Imaging Center
University of Washington, Seattle, WA USA
Laboratoire Parole et Langage
Aix-Marseille University
MEG@McGill
Soheila Samiee, PhD student
McConnell Brain Imaging Centre, Montreal Neurological Institute
McGill University, Montreal, QC Canada
Peter Donhauser, PhD student
McConnell Brain Imaging Centre, Montreal Neurological Institute
McGill University, Montreal, QC Canada
Jeremy Moreau, PhD student
Applications of MEG to presurgical evaluation
in medically refractory paediatric epilepsy patients
Konstantinos Nasiotis, PhD student
McConnell Brain Imaging Centre, Montreal Neurological Institute
McGill University, Montreal, QC Canada
Former collaborators
  |   |
Awesome contributors
MGH, Boston
Matti Hamalainen, Sheraz Khan
MIT, Boston
Seyed-Mahdi Khaligh-Razavi
USC, Los Angeles
Felix Darvas, Belma Dogdas, John Ermer, Esen Kucukaltun-Yildirim, Alexei Ossadtchi
UCSF, San Francisco
Darren Weber
CNRS, Paris
Antoine Ducorps, Guillaume Dumas, Line Garnero, Karim N'Diaye, Denis Schwartz, Lydia Yahia-Cherif
Neurospin / CEA / Inserm, Paris
Ghislaine Dehaene-Lambertz, Lucie Charles, Lauri Parkkonen
CERMEP / Inserm, Lyon
Claude Delpuech
Universite Aix-Marseille, France
Svetlana Pinet, Julien Lefevre
National Chiao Tung University, Taiwan
Hui-Ling Chan
MNE software
MNE is a software suite for MEG / EEG processing, developed at the Martinos Center for Biomedical Imaging, MGH. It contains many command line functions written in C and compiled for Linux and MacOSX, interactive tools for reviewing the recordings and the source estimates, and Matlab and Python code to interact with a wide variety of other environments.
Brainstorm and MNE are developed with the support of a common NIH grant (NIH/NCRR 1R01EB009048-01)
Community websites
NITRC: The source for Neuroimaging Tools and Resources
"Academic Software Applications for Electromagnetic Brain Mapping Using MEG and EEG":
Special issue of the journal Computation Intelligence and Neuroscience