6606
Comment:
|
8000
|
Deletions are marked like this. | Additions are marked like this. |
Line 1: | Line 1: |
===== CuttingGarden2023 Symposium: LA Garden Program ===== ===== WEDNESDAY 18th ===== |
= Cutting Garden 2023: Los Angeles Garden! = <<HTML(<img align="right" alt="cutting_lax_logo.png" class="attachment" src="/brainstorm/WorkshopLA2023?action=AttachFile&do=get&target=cutting_lax_logo.png" title="cutting_lax_logo.png" style="width: 35%;">)>> As part of the [[https://cuttinggardens2023.org/|CuttingGardens2023 conference]]. <<BR>> The Los Angeles (LA) Garden will be held at the Ming Hsieh Department of Electrical and Computer Engineering (EEB) at the University of Southern California (USC). This event is scheduled to be an in-person gathering, but there will also be an option to broadcast it to all Gardens. The LA Garden will span across two days. On the first day, we have scheduled a Brainstorm workshop and a Brainsuite Demo. The second day will feature local speakers presenting cutting-edge methods on Deep Neural Networks and Machine learning techniques applied to EEG data. Furthermore, we are arranging a live stream of the Global Program, allowing anyone interested to join remotely. External attendees are more than welcome to participate, but prior registration will be required for attendance. == WEDNESDAY 18th == |
Line 7: | Line 17: |
'''9:15 – ''' Richard Leahy (University of Southern California):'''[[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/WelcomeCuttingEEGLAGarden__intro_leahy.pdf|Opening of the LA Garden]]''' | '''9:15 – Richard Leahy''' (University of Southern California): |
Line 9: | Line 19: |
'''9:30 – ''' David Shattuck (University of California, Los Angeles): Introduction and Overview of Brainsuite | ''' [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/WelcomeCuttingEEGLAGarden__intro_leahy.pdf|Opening of the LA Garden]]''' '''9:30 – David Shattuck '''(University of California, Los Angeles): . Introduction and Overview of Brainsuite |
Line 13: | Line 27: |
'''10:30 – '''Anand Joshi (University of Southern California): [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/BrainSuiteToolsGardens_joshi.pdf|Brainsuite Tools & Discussion]] | '''10:30 – Anand Joshi''' (University of Southern California): |
Line 15: | Line 29: |
'''11:00 – '''Richard Leahy (University of Southern California): [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/BrainstormEEGOverviewCuttingGardens2023_leahy.pdf|Introduction to EEG/MEG Analysis]] | . [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/BrainSuiteToolsGardens_joshi.pdf|Brainsuite Tools & Discussion]] |
Line 17: | Line 31: |
'''11:45 –''' Cameron Sacks (Wearable Sensing): EEG Live Demo & Discussion | '''11:00 – Richard Leahy''' (University of Southern California): . [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/BrainstormEEGOverviewCuttingGardens2023_leahy.pdf|Introduction to EEG/MEG Analysis]] '''11:45 –''' '''Cameron Sacks''' (Wearable Sensing): . [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/wearableSensig_Cameron_compressed.pdf|EEG Live Demo & Discussion]] |
Line 23: | Line 43: |
. Raymundo Cassani (McGill University) & Takfarinas Medani (University of Southern California) | . '''Raymundo Cassani '''(McGill University) &''' Takfarinas Medani '''(University of Southern California) |
Line 28: | Line 48: |
'''13:00–13:30 '''[[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/2023_lax_tm_bst.pdf|Introduction to Brainstorm (lecture)]] | '''13:00–13:30 '''[[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/2023_lax_tm_bst.pdf|Introduction to Brainstorm (lecture)]] - [[https://www.youtube.com/watch?v=_h-X6GfxmpE|Youtube Video]] - |
Line 72: | Line 92: |
===== THURSDAY 19th ===== '' '' |
== THURSDAY 19th == |
Line 81: | Line 99: |
Session 1: Computational Tools and Pipelines for ML analysis; session chair: Richard Leahy.'' '' | '''Session 1: Computational Tools and Pipelines for ML analysis; session chair: Richard Leahy.'' '' ''' |
Line 83: | Line 101: |
. '''9:00–9:25- Arnaud Delorme '''(University of California, San Diego): “''[[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/BIDS_ml_usc_delorme.pdf|Machine learning and the BIDS EEG data format]]”'' '' '' . '''9:25–9:50- Tim Mullen''' (Intheon Labs):'' “Creating Deployable Workflows for EEG Signal Processing and ML/DL Using NeuroPype”'' '' '' . '''9:50–10:15''– ''Ivan Tashev''' (Microsoft Research)'': [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/2023_Garden_WorkloadEstimation_IvanTashev_final.pdf|“Workload estimation using brain- and bio- signals for adaptive training system”]]'' '' '' . '''10:15–10:40''– ''Bin He''' (Carnegie Mellon University)'': “AI/ML Enhances Dynamic Brain Imaging from EEG/MEG”'' . . '''Coffee '''''' Break (10:40–11:00)''' '' '' |
. '''9:00–9:25- Arnaud Delorme '''(University of California, San Diego): “''[[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/BIDS_ml_usc_delorme.pdf|Machine learning and the BIDS EEG data format]]”'' . '''9:25–9:50- Tim Mullen''' (Intheon Labs):'' '' |
Line 90: | Line 104: |
Session 2: Self Supervised Leaning; session chair: Takfarinas Medani '' '' | . ''“Creating Deployable Workflows for EEG Signal Processing and ML/DL Using NeuroPype”'' '' '' . '''9:50–10:15''– ''Ivan Tashev''' (Microsoft Research)'':'' . '' [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/2023_Garden_WorkloadEstimation_IvanTashev_final.pdf|“Workload estimation using brain- and bio- signals for adaptive training system”]]'' '' '' . '''10:15–10:40''– ''Bin He''' (Carnegie Mellon University)'':'' . '' “AI/ML Enhances Dynamic Brain Imaging from EEG/MEG”'' |
Line 92: | Line 110: |
. '''11:00–11:25''– ''Dominique Duncan''' (University of Southern California)'': [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/Cutting_EEG_2023_Duncan.pdf|“Unsupervised Multivariate Time-Series Transformers for Seizure Identification on EEG”]]'' '' '' . '''11:25–11:50''– ''Wenhui Cui '''(University of Southern California)'': [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/eeg_foundation_model_talk_Cui.pdf|“Neuro-GPT: A Foundation Model Pretrained on Large-Scale EEG Data”]]'' '' '' |
'''Coffee ''''''Break (10:40–11:00)'''''' ''' |
Line 95: | Line 112: |
. '''' ''' | '''Session 2: Self Supervised Leaning; session chair: Takfarinas Medani '' '' ''' |
Line 97: | Line 114: |
Lunch Break (12:00–13:00)''' '' '' ''' | . '''11:00–11:25''– ''Dominique Duncan''' (University of Southern California)'':'' . '' [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/Cutting_EEG_2023_Duncan.pdf|“Unsupervised Multivariate Time-Series Transformers for Seizure Identification on EEG”]]'' '' '' . '''11:25–11:50''– ''Wenhui Cui '''(University of Southern California)'':'' . '' [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/eeg_foundation_model_talk_Cui.pdf|“Neuro-GPT: A Foundation Model Pretrained on Large-Scale EEG Data”]]'' |
Line 99: | Line 119: |
Session 3: Machine Learning for brain computer interfaces; session chair: Shrikanth Narayanan''' '' '' ''' | '''Lunch Break (12:00–13:00) '' '' ''' |
Line 101: | Line 121: |
. '''13:00–13:30- Alexander Silva '''(University of California, San Francisco):''' [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/USCsymposium_Alex_Silva.pdf|“A high performance neuroprosthesis for speech decoding and avatar control]]''[[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/USCsymposium_Alex_Silva.pdf|“]]'' '' '' ''' . '''13:30–14:00''– ''Maryam Shanechi '''(University of Southern California)'':''' “AI-powered next-generation neurotechnologies”''''' '' '' . '''14:00–14:30''– ''Ludovic Bellier '''(University of California, Berkeley) '': [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/CuttingEEG20231029_LBellier.pdf|“Reconstructing Pink Floyd from human auditory cortex”]]'' '' '' |
'''Session 3: Machine Learning for brain computer interfaces; session chair: Shrikanth Narayanan '' '' ''' |
Line 105: | Line 123: |
Panel Discussion''' '' '' ''' | . '''13:00–13:30- Alexander Silva '''(University of California, San Francisco): . [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/USCsymposium_Alex_Silva.pdf|“A high performance neuroprosthesis for speech decoding and avatar control]]''[[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/USCsymposium_Alex_Silva.pdf|“]] '' . '''''13:30–14:00''''''''– ''Maryam Shanechi '''''(University of Southern California)'':'' '' ''' ''''' . ''“AI-powered next-generation neurotechnologies”'' '' '' '' ''' ''''' . '''14:00–14:30''– ''Ludovic Bellier '(University of California, Berkeley) '': '' '' ''''' . [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/CuttingEEG20231029_LBellier.pdf|“Reconstructing Pink Floyd from human auditory cortex”]] |
Line 107: | Line 130: |
. '''14:40–15:10'''''–''' '''Moderator: ''Shrikanth Narayanan and Kristina Lerman (University of Southern California)'': “The Role of Foundational Models in Spontaneous and Event-Related EEG“'' '' '' | '''Panel Discussion'' ''''' |
Line 109: | Line 132: |
Coffee Break(15:10–15:40)''' '' '' ''' | . '''14:40–15:10''– Moderator: ''Shrikanth Narayanan and Kristina Lerman''' (University of Southern California)'':'' '' ''' ''''' . ''“The Role of Foundational Models in Spontaneous and Event-Related EEG“'' '' '' '' ''' ''''' |
Line 111: | Line 135: |
Session 4: Machine Learning for neurological disorders; session chair: Kristina Lerman''' '' '' ''' | '''Coffee Break(15:10–15:40) ''' |
Line 113: | Line 137: |
. '''15:40–16:05''– ''Srikantan Nagarajan '''(University of California, San Francisco)'': [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/USCTalk_Oct2023_v3_Sri.pdf|“Machine learning algorithms for electromagnetic brain imaging in dementia”]]'' '' '' . '''16:05–16:30''– ''Dimitrios Pantazis''' (Massachusetts Institute of Technology)'': '' |
'''Session 4: Machine Learning for neurological disorders; session chair: Kristina Lerman''''' '' |
Line 116: | Line 139: |
'''''[[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/CuttingEEG_GardenLA2023_Pantazis.pdf|“Graph representation learning of MEG signals opens a window to aging trajectories and Alzheimer’s disease”]] '' ''' | . 15:40–16:05''– ''Srikantan Nagarajan '(University of California, San Francisco)'':'' '' '' . ''[[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/USCTalk_Oct2023_v3_Sri.pdf|“Machine learning algorithms for electromagnetic brain imaging in dementia”]]'' '' '' '' '' . '''16:05–16:30''''''''– ''Dimitrios Pantazis''''' (Massachusetts Institute of Technology)'':'' '' ''' ''' . [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/CuttingEEG_GardenLA2023_Pantazis.pdf|“Graph representation learning of MEG signals opens a window to aging trajectories and Alzheimer’s disease”]] . '''''16:30–16:55''– ''Jason da Silva Castanheira (McGill University)'':''''' '' ''' ''' . ''[[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/Cutting_Gardens_daSilvaCastanheira_short.pdf|“Inter-individual differences in neurophysiology vary with age and disease”]] '' ''' ''' |
Line 118: | Line 146: |
. ''''' '' ''' . '''16:30–16:55'''''– '''''Jason da Silva Castanheira''' (McGill University)'': [[https://neuroimage.usc.edu/resources/CuttingEEG2023finalSlides/Cutting_Gardens_daSilvaCastanheira_short.pdf|“Inter-individual differences in neurophysiology vary with age and disease”]]'' '' '' Closing and final remarks''' '' '' ''' |
'''Closing and final remarks''' |
Cutting Garden 2023: Los Angeles Garden!
As part of the CuttingGardens2023 conference.
The Los Angeles (LA) Garden will be held at the Ming Hsieh Department of Electrical and Computer Engineering (EEB) at the University of Southern California (USC). This event is scheduled to be an in-person gathering, but there will also be an option to broadcast it to all Gardens.
The LA Garden will span across two days. On the first day, we have scheduled a Brainstorm workshop and a Brainsuite Demo. The second day will feature local speakers presenting cutting-edge methods on Deep Neural Networks and Machine learning techniques applied to EEG data.
Furthermore, we are arranging a live stream of the Global Program, allowing anyone interested to join remotely. External attendees are more than welcome to participate, but prior registration will be required for attendance.
WEDNESDAY 18th
5:30 – [Global] Reproductible processing pipelines and multiverses
8:30 – Registration & Continental Breakfast
9:15 – Richard Leahy (University of Southern California):
9:30 – David Shattuck (University of California, Los Angeles):
- Introduction and Overview of Brainsuite
10:15 Coffee Break
10:30 – Anand Joshi (University of Southern California):
11:00 – Richard Leahy (University of Southern California):
11:45 – Cameron Sacks (Wearable Sensing):
12:00 – Lunch Break
12:30–17:30 – Tutorial – Hands-On Brainstorm
Raymundo Cassani (McGill University) & Takfarinas Medani (University of Southern California)
12:30–13:00 Onsite assistance in installing the material for the training session
13:00–13:30 Introduction to Brainstorm (lecture) - Youtube Video -
13:30–14:35 Loading anatomy and recordings
- Set anatomy
- Review Raw recordings
- Import events
14:35–15:35 Pre-processing
- Frequency filters
- Artefact detections
- Artifact correction with SSP
15:30–15:45 Coffee Break
15:45–16:20 Analysis sensor level
Import recording
Review trials
Trial averages
16:20–16:55 Source estimation
Forward Model (aka Head model)
Noise covariance matrix
Source estimation (from EEG and MEG recording)
16:55–17:15 Analysis source level
Cortex parcellations: Atlases and scouts
Noise covariance matrix
Source estimation (from EEG and MEG recording)
THURSDAY 19th
5:30 – [Global] Deep Neural Network (DNN) analysis for MEEG data
8:30 – Continental Breakfast
9:00 – 17:30 – [Local] Machine Learning and EEG
Session 1: Computational Tools and Pipelines for ML analysis; session chair: Richard Leahy.
9:00–9:25- Arnaud Delorme (University of California, San Diego): “Machine learning and the BIDS EEG data format”
9:25–9:50- Tim Mullen (Intheon Labs):
“Creating Deployable Workflows for EEG Signal Processing and ML/DL Using NeuroPype”
9:50–10:15– Ivan Tashev (Microsoft Research):
“Workload estimation using brain- and bio- signals for adaptive training system”
10:15–10:40– Bin He (Carnegie Mellon University):
“AI/ML Enhances Dynamic Brain Imaging from EEG/MEG”
Coffee Break (10:40–11:00)
Session 2: Self Supervised Leaning; session chair: Takfarinas Medani
11:00–11:25– Dominique Duncan (University of Southern California):
“Unsupervised Multivariate Time-Series Transformers for Seizure Identification on EEG”
11:25–11:50– Wenhui Cui (University of Southern California):
“Neuro-GPT: A Foundation Model Pretrained on Large-Scale EEG Data”
Lunch Break (12:00–13:00)
Session 3: Machine Learning for brain computer interfaces; session chair: Shrikanth Narayanan
13:00–13:30- Alexander Silva (University of California, San Francisco):
“A high performance neuroprosthesis for speech decoding and avatar control“
13:30–14:00– Maryam Shanechi (University of Southern California):
“AI-powered next-generation neurotechnologies”
14:00–14:30– Ludovic Bellier '(University of California, Berkeley) :
Panel Discussion
14:40–15:10– Moderator: Shrikanth Narayanan and Kristina Lerman (University of Southern California):
“The Role of Foundational Models in Spontaneous and Event-Related EEG“
Coffee Break(15:10–15:40)
Session 4: Machine Learning for neurological disorders; session chair: Kristina Lerman
15:40–16:05– Srikantan Nagarajan '(University of California, San Francisco):
“Machine learning algorithms for electromagnetic brain imaging in dementia”
16:05–16:30– Dimitrios Pantazis (Massachusetts Institute of Technology):
16:30–16:55– Jason da Silva Castanheira (McGill University):
“Inter-individual differences in neurophysiology vary with age and disease”
Closing and final remarks