Publications
Reference article
Tadel F, Baillet S, Mosher JC, Pantazis D, Leahy RM (2011)
Brainstorm: A User-Friendly Application for MEG/EEG Analysis
Computational Intelligence and Neuroscience, vol. 2011, ID 879716
See also: How to cite Brainstorm.
Publications from Brainstorm users
Videos
Tadel F, Baillet S
Brainstorm: Imaging neural activity at the speed of brain, March 2015Bae J, Deshmukh A, Song Y, Riera J
Brain source imaging in preclinical rat models of focal epilepsy using high-resolution EEG recordings
J Visualized Experiments, e52700 (2015)Bathelt J, O'Reilly H, De Haan
Cortical Source Analysis of High-Density EEG Recordings in Children
J Visualized Experiments, 88 (2014)Balderston NL, Schultz DH, Baillet S, Helmstetter FJ
How to Detect Amygdala Activity with Magnetoencephalography using Source Imaging
J Visualized Experiments, 76 (2013)
2015
Bidelman GM, Dexter L
Bilinguals at the ‘‘cocktail party’’: Dissociable neural activityin auditory–linguistic brain regions reveals neurobiological basis for nonnative listeners’ speech-in-noise recognition deficits
Brain and Language, 143:32–41, April 2015.Billeke P, Armijo A, Castillo D, Lopez T, Zamorano F, Cosmelli D, Aboitiz F
Paradoxical expectation: Oscillatory brain activity reveals social interaction impairment in schizophrenia
Biological Psychiatry, Available online: 19 Feb 2015Canales-Johnson A, Silva C, Huepe D, Rivera-Rei A, Noreika V, del Carmen Garcia M, Silva W, Ciraolo C, Vaucheret E, Sedeño L, Couto B, Kargieman L, Baglivo F, Sigman M, Chennu S, Ibáñez A, Rodríguez E, Bekinschtein TA
Auditory feedback differentially modulates behavioral and neural markers of objective and subjective performance when tapping to your heartbeat
Cerebral Cortex, Available online: 21 Apr 2015Cheaha D, Bumrungsri S, Chatpun S, Kumarnsit E
Characterization of in utero valproic acid mouse model of autism by local field potential in the hippocampus and the olfactory bulb
Neuroscience Research, Available online: 2 May 2015Cheng CH, Chan PYS, Baillet S, Lin SS
Age-related reduced somatosensory gating is associated with altered alpha frequency desynchronization
Neural Plasticity, Available online: 24 Feb 2015Cichy RM, Pantazis D
Can visual information encoded in cortical columns be decoded from magnetoencephalography data in humans?, arXiv:1503.08030Cortes-Briones JA, Cahill JD, Ranganathan M, Sewell RA, D'Souza DC, Skosnik PD
Testing differences in the activity of event-related potential sources: Important implications for clinical researchers
Clinical Neurophysiology, 126(1):215–218, Jan 2015Florin E, Baillet S
The brain's resting-state activity is shaped by synchronized cross-frequency coupling of oscillatory neural activity
NeuroImage, Available online: 10 Feb 2015Heers M, Chowdhury RA, Hedrich T, Dubeau F, Hall JA, Lina JM, Grova C, Kobayashi E
Localization Accuracy of Distributed Inverse Solutions for Electric and Magnetic Source Imaging of Interictal Epileptic Discharges in Patients with Focal Epilepsy
Brain Topography, Available online: 22 Jan 2015Jiang J, Zhang Q, Van Gaal S
Conflict awareness dissociates theta-band neural dynamics of the medial frontal and lateral frontal cortex during trial-by-trial cognitive control
NeuroImage, Available online: 6 May 2015Moratti S, Strange B, Rubio G
Emotional arousal modulation of right temporoparietal cortex in depression depends on parental depression status in women: First evidence
Journal of Affective Disorders, Available online: 6 Mar 2015Niso G,Rogers C,Moreau JT,Chen LY,MadjarC,Das S,Bock E,Tadel F,Evans A,Jolicoeur P,Baillet S
OMEGA: The Open MEG Archive
NeuroImage, Available online: 18-Apr-2015O'Reilly C, Godbout J, Carrier J, Lina JM
Combining time-frequency and spatial information for the detection of sleep spindles
Front Hum Neurosci, Available online: 27 Jan 2015Papadaniil CD, Kosmidou VE, Tsolaki AC, Hadjileontiadis LJ, Tsolaki M, Kompatsiaris I
Age effect in human brain responses to emotion arousing images: The EEG 3D-vector field tomography modeling approach
IEEE Autonomous Mental Development, Available online: 30 Mar 2015Seeber M, Scherer R, Wagner J, Solis-Escalante T, Muller-Putz GR
High and low gamma EEG oscillations in central sensorimotor areas are conversely modulated during the human gait cycle
NeuroImage, Available online: 24 Mar 2015Sekihara K, Nagarajan SS
Electromagnetic Brain Imaging: A Bayesian Perspective
Springer, 2015Strauss M, Sitt JD, King JR, Elbaz M, Azizi L, Buiatti M, Naccache L, Van Wassenhove V, Dehaene S
Disruption of hierarchical predictive coding during sleep
PNAS, Available online: 3 Mar 2015Wamain Y, Pluciennicka E, Kalénine S
A saw is first identified as an object used on wood: ERP evidence for temporal differences between thematic and functional similarity relations
Neuropsychologia, Available online: 26 Feb 2015Zhang L, Gan JQ, Wang H
Mathematically gifted adolescents mobilize enhanced workspace configuration of theta cortical network during deductive reasoning
Neuroscience, Available online: 13-Jan-2015
2014
Alkawadri R, Gaspard N, Goncharova II, Spencer DD, Gerrard JL, Zaveri H, Duckrow RB, Blumenfeld H, Hirsch LJ
The spatial and signal characteristics of physiologic high frequency oscillations
Epilepsia, 2014 Dec, 55(12):1986-95Amoruso L, Sedeño L, Huepe D, Tomio A, Kamienkowsky J, Hurtado E, Cardona JF, Alvarez González MA, Reiznik A, Sigman M, Manes F, Ibáñez A
Time to Tango: Expertise and contextual anticipation during action observation
NeuroImage, Published online: 12 May 2014Aissani C, Martinerie J, Yahia-Cherif L, Paradis AL, Lorenceau J
Beta, but not gamma, band oscillations index visual form-motion integration
PLoS One, Published online: 29 Apr 2014Baldauf D, Desimone R
Neural mechanisms of object-based attention
Science, Published online: 10 Apr 2014.Balderston NL, Schultz DH, Baillet S, Helmstetter FJ
Rapid Amygdala Responses during Trace Fear Conditioning without Awareness
PLOS ONE, Published online: 13 May 2014Basirat A, Dehaene S, Dehaene-Lambertz G
A hierarchy of cortical responses to sequence violations in three-month-old infants
Cognition, 5 May 2014, 132(2):137-150.Bathelt J, O'Reilly H, De Haan M
Cortical Source Analysis of High-Density EEG Recordings in Children
J Visualized Experiments, 88Becker H, Albera L, Comon P, Haardt M, Birot G, Wendling F, Gavaret M, Benar CG, Merlet I
EEG extended source localization: Tensor-based vs. conventional methods
NeuroImage, Published online: 22 Mar 2014.Billeke P, Zamorano F, Chavez M, Cosmelli D, Aboitiz F
Functional cortical network in alpha band correlates with social bargaining
PLOS One, Published online:6 Oct 2014Billeke P, Zamorano F, Lopez T, Rodriguez C, Cosmelli D, Aboitiz F
Someone has to give in: theta oscillations correlate with adaptive behavior in social bargaining
Soc Cogn Affect Neurosci, Dec 2014, 9(12):2041-8.Blouin J, Saradjian AH, Lebar N, Guillaume A, Mouchnino L
Opposed optimal strategies of weighting somatosensory inputs for planning reaching movements towards visual and proprioceptive targets
J Neurophysiology, Published: 1 Nov 2014Bojak I, Breakspear M
Neural Population Models for Neuroimaging
Encyclopedia of Computational Neuroscience, Springer, 2014Bola M, Sabel B
Rapid, transient, and frequency-specific topological reorganization of cognitive networks
bioRxiv preprint, Available online: 19 Dec 2014Butorina A, Prokofyev A, Nazarova M, Litvak V, Stroganova T
The mirror illusion induces high gamma oscillations in the absence of movement
NeuroImage, Published online: 19 Sept 2014Cheng CH, Baillet S, Hsiao FJ, Lin YY
Effects of aging on the neuromagnetic mismatch detection to speech sounds
Biological Psychology, Available online 15 Nov 2014Cohen MX
Effects of time lag and frequency matching on phase-based connectivity
J Neuroscience Methods, Published online: 16 Sept 2014Cohen MX
Analyzing neural time series data: Theory and practice
MIT Press, 2014Cichy RM, Pantazis D, Oliva A
Resolving human object recognition in space and time
Nature Neuroscience (2014)Di Rienzo F, Guillot A, Mateo A, Daligault S, Delpuech C, Rode G, Collet C
Neuroplasticity of imagined wrist actions after spinal cord injury: a pilot study
Experimental Brain Research, October 2014Dubarry AS, Badier JM, Trébuchon-Da Fonseca A, Gavaret M, Carron R, Bartolomei F, Liégeois-Chauvel C, Régis J, Chauvel P, Alario FX, Bénar C
Simultaneous recording of MEG, EEG and intracerebral EEG during visual stimulation: From feasibility to single-trial analysis
NeuroImage, Published online: 23 May 2014Dumas G, Soussignan R, Hugueville L, Martinerie J, Nadel J
Revisiting mu suppression in autism spectrum disorder
Brain Research, Published online: 19 August 2014El Zein M, Gamond L, Conty L, Grèzes J
Selective attention effects on early integration of social signals: Same timing, modulated neural sources
NeuroImage, Published online: 1 Nov 2014Escobar MJ, Huepe D, Decety J, Sedeño L, Messow MK, Baez S, Rivera-Rei A, Canales-Johnson A, Morales JP, Gómez DM, Schröeder J, Manes F, López V, Ibánez A
Brain signatures of moral sensitivity in adolescents with early social deprivation
Scientific Reports, 2014 Jun 19;4:5354Ferdowsi S, Sanei S, Abolghasemi V
A predictive modeling approach to analyze data in EEG–fMRI experiments
Int J Neural Syst, Available online: 3 Aug 2014Fesi JD, Mendola JD
Individual peak gamma frequency predicts switch rate in perceptual rivalry
Human Brain Mapping, Published online: 30 Sept 2014Foti D, Weinberg A, Bernat EM, Proudfit GH
Anterior cingulate activity to monetary loss and basal ganglia activity to monetary gain uniquely contribute to the feedback negativity
Clinical Neurophysiology, Published online: 5 Oct 2014Frey J, Gervais R, Fleck S, Lotte F, Hachet M
Teegi: Tangible EEG Interface
UIST conference 2014Galan F, Baker MR, Alter K, Baker ST
Degraded EEG decoding of wrist movements in absence of kinaesthetic feedback
Human Brain Mapping, Published online: 12 Oct 2014Gale JT, Gonzalez-Martinez J
Examining Decision-making in Epilepsy Patients: Using SEEG to Unravel Pathophysiological Mechanisms in Psychiatry
Cleveland Clinic, Psychiatry Insights 2014Galvao-Carmona A, González-Rosa JJ, Hidalgo-Muñoz AR, Páramo D, Benítez ML, Izquierdo G3, Vázquez-Marrufo M
Disentangling the attention network test: behavioral, event related potentials, and neural source analyses
Front Hum Neurosci, 8:813Giacometti P, Perdue KL, Diamond SG
Algorithm to find high density EEG scalp coordinates and analysis of their correspondence to structural and functional regions of the brain
J Neuroscience Methods, Published online: 24 Apr 2014Giacometti P, Diamond SG
Correspondence of electroencephalography and near-infrared spectroscopy sensitivities to the cerebral cortex using a high-density layout
Neurophotonics, 1(2), 025001 (Sep 02, 2014)Gonzalez-Rosa JJ, Natali F, Tettamanti A, Cursi M, Velikova S, Comi G, Gatti R, Leocani L
Action observation and motor imagery in performance of complex movements: Evidence from EEG and kinematics analysis
Behav Brain Res, Available online: 19 Dec 2014Graziano M, Parra LC, Sigman M
Neural correlates of perceived confidence in a partial report paradigm
J Cogn Neurosci, Available online: 12 Nov 2014Grosse-Wentrup M, Schölkopf B
A brain–computer interface based on self-regulation of gamma-oscillations in the superior parietal cortex
J Neural Eng, 11:5Heers M, Hedrich T, An D, Dubeau F, Gotman J, Grova C, Kobayashi E (2014)
Spatial correlation of hemodynamic changes related to interictal epileptic discharges with electric and magnetic source imaging
Human Brain Mapping, Published online: 24 Feb 2014.Hochman EY, Vaidya AR, Fellows LK
Evidence for a role for the dorsal anterior cingulate cortex in disengaging from an incorrect action
PLOS ONE, Published online: 26 Jun 2014Horr NK, Braun C, Volz KG
Feeling before knowing why: The role of the orbitofrontal cortex in intuitive judgments - an MEG study
Cogn Affect Behav Neurosci, 14:1271-1285Hsiao FJ, Chen WT, Wang YJ, Yan SH, Lin YY
Altered source-based EEG coherence of resting-state sensorimotor network in early-stage Alzheimer's disease compared to mild cognitive impairment
Neurosci Lett, 2014 Jan 13, 558:47-52Hsiao FJ, Chen WT, Wang PN, Cheng CH, Lin YY
Temporo-frontal functional connectivity during auditory change detection is altered in Alzheimer's disease
Human Brain Mapping, Published online: 27 Jun 2014Hsiao FJ, Hsieh FY, Chen WT, Chu DC, Lin YY
Altered Resting-State Cortical EEG Oscillations in Patients With Severe Asymptomatic Carotid Stenosis
Clin EEG Neurosci, Published online: 2 Dec 2014Huang S, Chang WT, Belliveau JW, Hämäläinen M, Ahveninen J
Lateralized parietotemporal oscillatory phase synchronization during auditory selective attention
Neuroimage, 2013 Oct 31, pii: S1053-8119(13)01066-5Iasemidis LD, Vlachos I, Krishnan B, Alexopoulos A
System and method for identifying a focal area of abnormal network interactions in the brain
US Patent #20140276187Isik L, Meyers EM, Leibo JZ, Poggio T
The dynamics of invariant object recognition in the human visual system
J Neurophysiol, 111(1):91-102Johnson MA, Thompson S, Gonzalez-Martinez J, Park HJ, Bulacio J, Najm I, Kahn K, Kerr M, Sarma SV, Gale JT
Performing behavioral tasks in subjects with intracranial electrodes
J Visualized Experiments, 92Jones SE, Beall EB, Najm I, Sakaie KE, Phillips MD, Zhang M, Gonzalez-Martinez JA
Low consistency of four brain connectivity measures derived from intracranial electrode measurements
Front Neurol, Published online: 19 Dec 2014Kabdebon C, Leroy F, Simonnet H, Perrot M, Dubois J, Dehaene-Lambertz G
Anatomical correlations of the international 10–20 sensor placement system in infants
NeuroImage, Published online: 23 May 2014Khan S, Lefevre J, Baillet S, Michmizos KP, Ganesan S, Kitzbichler MG, Zetino M, Hamalainen MS, Papadelis C, Kenet T
Encoding cortical dynamics in sparse features
Front Hum Neurosci, Available online: 2014 May 23Korats G, Ranta R, Le Cam S, Louis-Dorr V
Dipolar estimates of the cortical map
IEEE EMBC 2014:1123-1126Krishnan B, Vlachos I, Wang ZI, Mosher J, Najm I, Burgess R, Iasemidis L, Alexopoulos AV
Epileptic focus localization based on resting state interictal MEG recordings is feasible irrespective of the presence or absence of spikes
Clinical Neurophysiology, Published online: 11 Aug 2014LaPlante RA, Douw L, Tang W, Stufflebeam SM
The Connectome Visualization Utility: Software for Visualization of Human Brain Networks
PloS one, Published online: 01 Dec 2014Lenartowicz A, Simpson GV, Haber CM, Cohen MS
Neurophysiological Signals of Ignoring and Attending Are Separable and Related to Performance during Sustained Intersensory Attention
J Cogn Neurosci, Published online: 25 Mar 2014Machado A, Marcotte O, Lina J, Kobayashi E, Grova C
Optimal optode montage on electroencephalography/functional near-infrared spectroscopy caps dedicated to study epileptic discharges
J Biomedical Optics, 19(2):026010Machado AG, Gopalakrishnan R, Plow EB, Burgess RC, Mosher JC
A magnetoencephalography study of visual processing of pain anticipation
J Neurophysiol, 2014 Jul 15, 112(2):276-86Mento G, Tarantino V, Vallesi A, Silvia P
Spatiotemporal Neurodynamics Underlying Internally and Externally Driven Temporal Prediction: A High Spatial Resolution ERP Study
J Cognitive Neuroscience, Published online: 9 Sept 2014Meyer T, Peters J, Zander TO, Scholkopf B, Grosse-Wentrup M
Predicting motor learning performance from Electroencephalographic data
J NeuroEng Rehab, 2014, 11:24Momin R, Mir HS, Al-Nashash H
Brain Source Localization in the Presence of Leadfield Perturbations
IEEE EMBC, 2014:4551-4554Mousas A, Simos PG, Rezaie R, Papanicolaou AC
Estimation of Regional Activation Maps and Interdependencies from Minimum Norm Estimates of Magnetoencephalography (MEG) Data
Neuromethods, 91: 267–289, Published online: 17 May 2014Odabaee M, Tokariev A, Layeghy A, Mesbah M, Colditz PB, Ramon C, Vanhatalo S
Neonatal EEG at scalp is focal and implies high skull conductivity in realistic neonatal head models
NeuroImage, Published online: 13 Apr 2014Ofner P, Muller-Putz GR
Using a Non-Invasive Decoding Method to Classify Rhythmic Movement Imaginations of the Arm in Two Planes
IEEE Trans Biomed Eng, Available online: 4 Dec 2014Papadelis C, Ahtam B, Nazarova M, Nimec D, Snyder B, Grant PE, Okada Y
Cortical somatosensory reorganization in children with spastic cerebral palsy: a multimodal neuroimaging study
Front Hum Neurosci, Published online: 12 Sep 2014Park HD, Correia S, Ducorps A, Tallon-Baudry C
Spontaneous fluctuations in neural responses to heartbeats predict visual detection
Nature Neuroscience, Published online: 09 Mar 2014Pegado F, Comerlato E, Ventura F, Jobert A, Nakamura K, Buiatti M, Ventura P, Dehaene-Lambertz G, Kolinsky R, Morais J, Braga LW, Cohen L, Dehaene S
Timing the impact of literacy on visual processing
PNAS, Available online: 23 Oct 2014Pihko E, Nevalainen P, Vaalto S, Laaksonen K, Mäenpää H, Valanne L, Lauronen
Reactivity of sensorimotor oscillations is altered in children with hemiplegic cerebral palsy: A magnetoencephalographic study
Human Brain Mapping, Published online: 12 Feb 2014Recasens M, Leung S, Grimm S, Nowak R, Escera C
Repetition suppression and repetition enhancement underlie auditory memory-trace formation in the human brain: an MEG study
NeuroImage, 108:75-86, Published online: 17 Dec 2014Rodrigues J, Andrade A
Synthetic neuronal datasets for benchmarking directed connectivity metrics
PeerJ PrePrint, Available online: 19 Dec 2014Rogasch NC, Thomson RH, Farzan F, Fitzgibbon BM, Bailey NW, Hernandez-Pavon JC, Daskalakis ZJ, Fitzgerald PB
Removing artefacts from TMS-EEG recordings using independent component analysis: Importance for assessing prefrontal and motor cortex network properties
NeuroImage, Published online: 25 Jul 2014Rohaut B, Faugeras F, Chausson N, King JR, El Karoui I, Cohen L, Naccache L
Probing ERP correlates of verbal semantic processing in patients with impaired consciousness
Neuropsychologia, Available online 22 Nov 2014Seeber M, Scherer R, Wagner J, Solis-Escalante T, Müller-Putz GR
EEG beta suppression and low gamma modulation are different elements of human upright walking
Front Hum Neurosci, Published online: 08 Jul 2014Skipper JI
Echoes of the spoken past: how auditory cortex hears context during speech perception
Philos Trans R Soc Lond B Biol Sci, 2014 Sep 19;369(1651)Smith MM, Weaver KE, Grabowski TJ, Rao RP, Darvas F
Non-invasive detection of high gamma band activity during motor imagery
Front Hum Neurosci, Published online: 24 Sep 2014Stenroos M, Hunoldc A, Haueisenc J
Comparison of three-shell and simplified volume conductor models in magnetoencephalography
NeuroImage, 94:337-48, Published online: 1 Jul 2014Sugata H, Hirata M, Yanagisawa T, Shayne M, Matsushita K, Goto T, Yorifuji S, Yoshimine T
Alpha band functional connectivity correlates with the performance of brain-machine interfaces to decode real and imagined movements
Front Hum Neurosci, 2014 Aug 8;8:620Suzuki M, Noguchi Y, Kakigi R
Temporal dynamics of neural activity underlying unconscious processing of manipulable objects
Cortex, 50:100-114Tesche CD, Kodituwakku PW, Garcia CM, Houck JM
Sex-related differences in auditory processing in adolescents with fetal alcohol spectrum disorder: A magnetoencephalographic study
NeuroImage: Clinical, Available online: 17 Dec 2014Thibault RT, Lifshitz M, Jones JM, Raz A
Posture alters human resting-state
Cortex, Published online: 28 Jun 2014Verweij IM, Romeijn N, Smit DJ, Piantoni G, Van Someren EJ, van der Werf YD
Sleep deprivation leads to a loss of functional connectivity in frontal brain regions
BMC Neuroscience, 15(1):88Witte M, Galán F, Waldert S, Braun C, Mehring C
Concurrent stable and unstable cortical correlates of human wrist movements
Human Brain Mapping, Published online: 22 Jan 2014Xiang J, Luo Q, Kotecha R, Korman A, Zhang F, Luo H, Fujiwara H, Hemasilpin N, Rose DF
Accumulated source imaging of brain activity with both low and high-frequency neuromagnetic signals
Front Neuroinform, 8:57, 21 May 2014Yokoyama T, Noguchi Y, Koga H, Tachibana R, Saiki J, Kakigi R, Kita S
Multiple neural mechanisms for coloring words in synesthesia
NeuroImage, 94:360-71Zerouali Y, Lina JM, Sekerovic Z, Godbout J, Dube J, Jolicoeur P, Carrier J
A time-frequency analysis of the dynamics of cortical networks of sleep spindles from MEG-EEG recordings
Front Neurosci, 28 Oct 2014
2013
Attal Y, Schwartz D
Assessment of Subcortical Source Localization Using Deep Brain Activity Imaging Model with Minimum Norm Operators: A MEG Study
PLOS ONE, 8(3):e59856Balderston NL, Schultz DH, Baillet S, Helmstetter FJ
How to Detect Amygdala Activity with Magnetoencephalography using Source Imaging
J Visualized Experiments, 76Bathelt J, O'Reilly H, Clayden JD, Cross JH, de Haan M
Functional brain network organisation of children between 2 and 5 years derived from reconstructed activity of cortical sources of high-density EEG recordings
Neuroimage, Epub S1053-8119(13)00638-1Charles L, Van Opstal F, Marti S, Dehaene S
Distinct brain mechanisms for conscious versus subliminal error detection
Neuroimage, 73:80-94Chavez M, De Vico Fallani F, Valencia M, Artieda J, Mattia D, Latora V, Babiloni F
Node Accessibility in Cortical Networks During Motor Tasks
Neuroinformatics, Published online 28 May 2013Cheng CH, Baillet S, Hsiao FJ, Lin YY
Effects of aging on neuromagnetic mismatch responses to pitch changes
Neuroscience Letters, 544:20-4Chennu S, Noreika V, Gueorguiev D, Blenkmann A, Kochen S, Ibáñez A, Owen AM, Bekinschtein TA
Expectation and Attention in Hierarchical Auditory Prediction
J Neurosci, 33(27):11194-11205Chowdhury RA, Lina JM, Kobayashi E, Grova C
MEG Source Localization of Spatially Extended Generators of Epileptic Activity: Comparing Entropic and Hierarchical Bayesian Approaches
PLOS ONE, 8(2):e55969Clarke A, Taylor KI, Devereux B, Randall B, Tyler LK
From Perception to Conception: How Meaningful Objects Are Processed over Time
Cerebral Cortex, 23(1):187-197 (also using SPM)Clerc M, Papadopoulo T, Bénar C
Single-Trial Analysis of Bioelectromagnetic Signals: The Quest for Hidden Information
Modeling in Computational Biology and Biomedicine, pp 237-259Cockfield J, Su K, Robbins KA
MOBBED: a computational data infrastructure for handling large collections of event-rich time series datasets in MATLAB
Front Neuroinform, 2013 Oct 10;7:20Cohen MX, Ridderinkhof KR
EEG Source Reconstruction Reveals Frontal-Parietal Dynamics of Spatial Conflict Processing
PLOS ONE, 8(2):e57293Darvas F, Rao RP, Murias M
Localized high gamma motor oscillations respond to perceived biologic motion
J Clin Neurophysiol, 30(3):299-307Dumas T, Dubal S, Attal Y, Chupin M, Jouvent R
MEG Evidence for Dynamic Amygdala Modulations by Gaze and Facial Emotions
PLOS ONE, 8(9): e74145Fasoula A, Attal Y, Schwartz D
Comparative performance evaluation of data-driven causality measures applied to brain networks
J Neuroscience Methods, 215(2):170-89Ferradal SL, Eggebrecht AT, Hassanpour M, Snyder AZ, Culver JP
Atlas-based head modeling and spatial normalization for high-density diffuse optical tomography: in vivo validation against fMRI
Neuroimage, Epub S1053-8119(13)00322-4Files BT, Auer ET Jr, Bernstein LE
The visual mismatch negativity elicited with visual speech stimuli
Front Hum Neurosci, 7:371Florin E, Bock E, Baillet S
Targeted reinforcement of neural oscillatory activity with real-time neuroimaging feedback
Neuroimage, 2013 Nov 6, S1053-8119(13)01051-3García-Pacios J, Gutiérrez R, Solesio E, Moratti S, Ruiz-Vargas JM, López-Frutos JM, Maestú F
Early Prefrontal Activation As a Mechanism to Prevent Forgetting in the Context of Interference
The American Journal of Geriatric Psychiatry, 21(6):580-8Gramfort A, Luessi M, Larson E, Engemann DA, Strohmeier D, Brodbeck C, Goj R, Jas M, Brooks T, Parkkonen L, Hämäläinen M
MEG and EEG data analysis with MNE-Python
Front Neurosci, 26 December 2013Gramfort A, Luessi M, Larson E, Engemann DA, Strohmeier D, Brodbeck C, Parkkonen L, Hämäläinen MS
MNE software for processing MEG and EEG data
Neuroimage, 2013 Oct 24, S1053-8119(13)01050-1Hata M, Homae F, Hagiwara H
Semantic categories and contexts of written words affect the early ERP component
Neuroreport, 24(6):292-7Homa L, Calvetti D, Hoover A, Somersalo E
Bayesian Preconditioned CGLS for Source Separation in MEG Time Series
SIAM Journal on Scientific Computing, 35(3):B778–B798Hsiao FJ, Cheng CH, Chen WT, Lin YY
Neural correlates of somatosensory paired-pulse suppression: A MEG study using distributed source modeling and dynamic spectral power analysis
Neuroimage, 72(15):133-142Hsiao FJ, Wang YJ, Yan SH, Chen WT, Lin YY
Altered default mode network connectivity in older adults with cognitive complaints and amnestic mild cognitive impairment
PLOS ONEJausovec N, Jausovec K
Increasing working memory capacity with theta transcranial alternating current stimulation (tACS)
Biol Psychol, 2013 Nov 27Khan S, Cohen D
Note: Magnetic noise from the inner wall of a magnetically shielded room
Review of Scientific Instruments, 84:056101Khan S, Gramfort A, Shetty NR, Kitzbichler MG, Ganesan S, Moran JM, Lee SM, Gabrieli JD, Tager-Flusberg HB, Joseph RM, Herbert MR, Hämäläinen MS, Kenet T
Local and long-range functional connectivity is reduced in concert in autism spectrum disorders
PNAS, 110(8):3107-12Klados MA, Kanatsouli K, Antoniou I, Babiloni F, Tsirka V, Bamidis PD, Micheloyannis S
A Graph Theoretical Approach to Study the Organization of the Cortical Networks during Different Mathematical Tasks
PLoS One, 8(8):e71800Kundu B, Sutterer DW, Emrich SM, Postle BR
Strengthened Effective Connectivity Underlies Transfer of Working Memory Training to Tests of Short-Term Memory and Attention
J Neuroscience, 33(20)Kundu B, Johnson JS, Postle BR
Trait-like differences in underlying oscillatory state predict individual differences in the TMS-evoked response
Brain Stimul, 7(2):234-42Lee C, Kim SM, Jung YJ, Im CH, Kim DW, Jung KY
Causal influence of epileptic network during spike-and-wave discharge in juvenile myoclonic epilepsy
Epilepsy Res, 2013 Nov 16, pii: S0920-1211(13)00289-1Liebenthal E, Sabri M, Beardsley SA, Mangalathu-Arumana J, Desai A
Neural Dynamics of Phonological Processing in the Dorsal Auditory Stream
J Neuroscience, 33(39): 15414-15424Kowalczyk L, Bajera A, Goszczynska H, Zalewska E, Krolicki L
Integration of EEG and SPECT data acquired from simultaneous examinations
Biocybernetics and Biomedical Engineering (in press)McIntosh AR, Vakorin V, Kovacevic N, Wang H, Diaconescu A, Protzner AB
Spatiotemporal Dependency of Age-Related Changes in Brain Signal Variability
Cereb Cortex, Epub 2013 Feb 8Machado S, Arias-Carrión O, Paes F, Ribeiro P, Cagy M, Piedade R, Ferreira Almada L, Anghinah R, Basile L, Moro MF, Orsini M, Guilherme Silva J, Cardoso Silva A, Nardi AE
Changes in Cortical Activity During Real and Imagined Movements: an ERP Study
Clinical Practice and Epidemiology in Mental Health, 9:196-201Mento G, Tarantino V, Sarlo M, Bisiacchi PS
Automatic Temporal Expectancy: A High-Density Event-Related Potential Study
PLOS ONE 8(5): e62896Ofner P, Müller-Putz GR
Time-Domain Correlations of Imagined Arm Positions with Brain Sources
Biomedical EngineeringOh H, Gentili RJ, Costanzo ME, Goodman RN, Lo JC, Rietschel JC, Saffer M, Hatfield BD
Understanding Brain Connectivity Patterns during Motor Performance under Social-Evaluative Competitive Pressure
in Foundations of Augmented CognitionPapadelis C, Harini C, Ahtam B, Doshi C, Grant H, Okada Y
Current and emerging potential for magnetoencephalography in pediatric epilepsy
Journal of Pediatric Epilepsy, 2(1)Paradis AL, Morel S, Series P, Lorenceau J
Speeding up the brain: when spatial facilitation translates into latency shortening
Front Hum Neurosci, 6:330Ravan M, Reilly JP, Hasey G
Minimum variance brain source localization for short data sequences
IEEE Trans Biomed Eng, in pressSaeidias L, Ahmad T, Alias N, Ghanbari M
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"Evaluation of EEG localization methods using realistic simulations of interictal spikes", Neuroimage, 29(3):734-753Le Van Quyen M, Amor F, Rudrauf D
"Exploring the dynamics of collective synchronizations in large ensembles of brain signals," J Physiol Paris, 100(4):194-200
2005
Sergent C, Baillet S, Dehaene S
"Timing of the brain events underlying access to consciousness during the attentional blink," Nat Neurosci, 8(10):1391-1400Amor F, Rudrauf D, Navarro V
"Imaging brain synchrony at high spatio-temporal resolution: application to MEG signals during absence seizures," Signal Processing, 85(11):2101-11N'diaye K, Pfeuty M, Ragot R
"Parsing the temporal evolution of brain activity in duration discrimination with electro- and magneto-encephalography," J Cog Neurosci, 46-46 Suppl. S 2005
2004
N'Diaye K, Ragot R, Garnero L
"What is common to brain activity evoked by the perception of visual and auditory filled durations? A study with MEG and EEG co-recordings," Cogn Brain Res, 21(2):250-268
Publications on Brainstorm's code
2011
Tadel F, Baillet S, Mosher JC, Pantazis D, Leahy RM (2011)
"Brainstorm: A user friendly application for MEG/EEG analysis," Comput Intell Neurosci, vol. 2011, Article ID 879716, 13 pages, 2011. doi:10.1155/2011/879716 [ html, pdf ]
2000-2010
Hamalainen MS, Lin FH, Mosher JC (2010)
“Anatomically and functionally constrained minimum-norm estimates,” in MEG: An Introduction to Methods, Hansen PC, Kringelbach ML, Salmelin R, Eds. Oxford: Oxford University Press.Lefèvre J, Baillet S (2009)
"Optical flow approaches to the identification of brain dynamics", Hum Brain Mapp, 30(6):1887-1897Soto JLP, Pantazis D, Jerbi K, Lachaux JP, Garnero L, Leahy RM (2009)
"Detection of Event-Related Modulations of Oscillatory Brain Activity with Multivariate Statistical Analysis of MEG Data," Hum Brain Mapp, 30(6):1922-1934Pantazis D, Nichols TE, Baillet S, Leahy RM (2005)
"A Comparison of Random Field Theory and Permutation Methods for the Statistical Analysis of MEG data", Neuroimage, 25(2):355-68Darvas F, Rautiainen M, Pantazis D, Benali H, Baillet S, Mosher JC, Garnero L, Leahy RM (2005)
"Investigations of dipole localization accuracy in MEG using the bootstrap", Neuroimage, 25(2):383-394Jerbi K, Baillet S, Mosher JC, Nolte G, Garnero L, Leahy RM (2004)
“Localization of Realistic Cortical Activity in MEG using Current Multipoles,” Neuroimage, 22(2):779-93Ossadtchi A, Baillet A, Mosher JC, Thyerlei D, Sutherling W, Leahy RM (2004)
"Automated Interictal Spike Detection and Source Localization in MEG using ICA and Spatio-Temporal Clustering," Clinic Neurophy, 115(3):508-22Pantazis D, Nichols TS, Baillet S, Leahy RM (2003)
"Spatiotemporal Localization of Significant Activation in MEG using Permutation Tests," Inf Process Med Imaging, 18:512-23Jerbi K, Mosher JC, Baillet S, Leahy RM (2002)
"On MEG Forward Modelling using Multipolar Expansions," Phys Med Biol, 47(4):523-55Baillet S, Mosher JC, Leahy RM (2001)
"Electromagnetic Brain Mapping," IEEE Signal Processing Magazine, 18(6):14-30 pdfErmer JJ, Mosher JC, Baillet S, Leahy RM (2001)
"Rapidly recomputable EEG forward models for realistic head shapes," Phys Med Biol, 46(4):1265-1281 pdfErmer JJ, Mosher JC, Huang MX, Leahy RM (2000)
"Paired MEG data set source localization using recursively applied and projected (RAP) MUSIC," IEEE Trans Biomed Eng, 47(9):1248-60 pdfMosher JC, Baillet S, Jerbi K, Leahy RM (2000)
"MEG multipolar modeling of distributed sources using RAP-MUSIC," Signals, Systems and Computers 2000, Conference Record of the Thirty-Fourth Asilomar Conference, 1:318-322 pdf
1990-2000
Mosher JC, Baillet S, Leahy RM (1999)
"EEG Source Localization and Imaging Using Multiple Signal Classification Approaches," J Clin Neurophysiol, 16(3):225-38Mosher JC, Leahy RM, Shattuck DW, Baillet S (1999)
"MEG Source Imaging using Multipolar Expansions," In 16th Conference on Information Processing in Medical Imaging, LCNS, pp. 15–28pdfMosher JC, Leahy RM, Lewis PS (1999)
"EEG and MEG: forward solutions for inverse methods," IEEE Trans Biomed Eng, 46(3):245-59 pdfMosher JC, Leahy RM (1999)
"Source localization using recursively applied and projected (RAP) MUSIC," IEEE Trans Biomed Eng, 47(9):1248-60 pdfHuang MX, Mosher JC, Leahy RM (1999)
"A sensor-weighted overlapping-sphere head model and exhaustive head model comparison for MEG," Phys Med Biol, 44:423-440 pdfMosher JC, Leahy RM (1998)
"Recursive MUSIC: A framework for EEG and MEG source localization," IEEE Trans Biomed Eng, 45(11):1342 -54 pdfLeahy RM, Mosher JC, Spencer ME, Huang MX, Lewine JD (1998)
"A study of dipole localization accuracy for MEG and EEG using a human skull phantom. Electroencephalography," Clin Neurophysiol, 107(2):159-73 pdfMosher JC, Leahy RM, Huang MX, Spencer ME (1997)
"Modeling versus Accuracy in EEG and MEG data," NFSI '97 in Biomedizinische Technik, 42(1):5-8 pdfPhillips JW, Leahy RM, Mosher JC, Timsari B (1997)
"Imaging neural activity using MEG and EEG," IEEE Eng Med Biol Mag, 16(3):34-42 pdfPhillips JW, Leahy RM, Mosher JC (1997)
"MEG-based imaging of focal neuronal current sources," IEEE Trans Med Imaging, 16(3):338-48pdfPhillips JW, Leahy RM, Mosher JC (1996)
"Dynamic Bayesian imaging using the magnetoencephalogram," Engineering in Medicine and Biology Society, 18th Annual International Conference of the IEEE, 2: 817-18pdfPhillips J, Leahy RM, Mosher JC (1996)
"Dynamic MEG Imaging of Focal Neuronal Sources," Proc IEEE Nucl Sci Symp and Medical Imag Conf, 1928-32. pdfMosher JC, Leahy RM, Lewis PS (1995)
"Matrix kernels for MEG and EEG source localization and imaging," Acoustics, Speech, and Signal Processing, ICASSP-95, 5:2943-6pdfLewis PS, Mosher JC, Leahy RM (1995)
"Neuromagnetic source reconstruction," Acoustics, Speech, and Signal Processing, ICASSP-95, 5:2911-4pdfMosher JC, Leahy RM, Lewis PS (1993)
"Biomagnetic localization from transient quasi-static events," Acoustics, Speech, and Signal Processing, ICASSP-93, 1:91-4 pdfMosher JC, Leahy RM, Lewis P (1992)
"Multiple dipole modeling and localization from spatiotemporal MEG data," IEEE Trans Biomed Eng, 541-57 pdfMosher JC, Spencer ME, Leahy RM, Lewis PS (1992)
"Error bounds for MEG and EEG source localization," Signals, Systems and Computers, 1992, Conference Record of The Twenty-Sixth Asilomar Conference, 150-5 pdf
Other
Brainstorm has been cited as one of the 50 successful open-source projects that are changing medicine [#22] (2011) link.
Computer world: Open source medicine puts health above profits (2012). Link
References
Useful, mostly technical, background reading:
[1] S Baillet, JC Mosher, and RM Leahy, "Electromagnetic brain mapping," IEEE Signal processing magazine, vol. 18, pp. 14-30, 2001.
[2] M Huang, J Mosher, and R Leahy, "A sensor-weighted overlapping-sphere head model and exhaustive head model comparison for MEG," Phys. Med. Biol., vol. 44, no. 2, pp. 423–440, 1999.
[3] F Darvas, JJ Ermer, JC Mosher, and Leahy RM, "Generic head models for atlas-based EEG source analysis," Human Brain Mapping, vol. 27, no. 2, pp. 129-143, 2006.
[4] JC Mosher, RM Leahy and P Lewis , "Multiple dipole modeling and localization from spatiotemporal MEG data, "IEEE Trans. Biomed. Eng., vol. 39, no. 5, pp. 541-557, June 1992.
[5] JW Phillips, RM Leahy, JC Mosher, "MEG-based imaging of focal neuronal current sources," IEEE Transactions on Medical Imaging, vol. 16, no. 3, pp. 338-348, June 1997.
[6] S Baillet and L Garnero, "A Bayesian approach to introducing anatomo-functional priors in the EEG /MEG inverse problem," IEEE Trans. Biomed. Eng., vol. 44, pp. 374-385, 1997.
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[15] HB Hui, D Pantazis, SL Bressler, and RM Leahy, "Identifying true cortical interactions in MEG using the nulling beamformer," NeuroImage, 2009.
[16] JLP Soto, D Pantazis, K Jerbi, JP Lachaux, S Baillet, and RM Leahy, "Canonical Correlation Analysis Applied to Functional Connectivity in MEG," IEEE International Symposium on Biomedical Imaging (ISBI), April 2010.
[17] D Pantazis, TE Nichols, S Baillet, and RM Leahy, "A Comparison of Random Field Theory and Permutation Methods for the Statistical Analysis of MEG data," Neuroimage, vol. 25, pp. 355-368, April 2005.
[18] S Baillet, JC Mosher, and RM Leahy, "Brainstorm beta release: a Matlab software package for MEG signal processing and source localization and visualization," Neuroimage, vol. 11, p. 915, 2000.
[19] JC Mosher, S Baillet, F Darvas, D Pantazis, E Kucukaltun-Yildirim, and RM Leahy, "Brainstorm Electromagnetic Imaging Software," IJBEM, vol. 7, no. 2, pp. 189-190, 2005.
[20] A Tzelepi, N Laskaris, A Amditis, and Z Kapoula, "Cortical activity preceding vertical saccades: A MEG study," Brain Research, 2010.
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[22] T Bekinschtein, S Dehaene, B Rohaut, F Tadel, L Cohen, and L Naccache, "Neural signature of the conscious processing of auditory regularities," PNAS, vol. 106, pp. 1672-1677, February 2009.
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