|
Size: 1750
Comment:
|
Size: 815
Comment: FUCK THIS FUCKING LIFE
|
| Deletions are marked like this. | Additions are marked like this. |
| Line 1: | Line 1: |
| = NIRSTORM: a Brainstorm plugin specialized in the analysis of fNIRS data = {{attachment:logo_nirstorm.png||width="40%"}} |
= NIRSTORM: a Brainstorm extension dedicated to functional Near Infrared Spectroscopy (fNIRS) data analysis, advanced 3D reconstructions, and optimal probe design. = Authors: Édouard Delaire, Lea Larreur, Dr. Christophe Grova |
| Line 4: | Line 4: |
| Author: Édouard Delaire, Lea Larreur, Dr. Zhengchen Cai, Dr. Christophe Grova | This tutorial aims to introduce NIRSTORM. NISTORM is a plug-in dedicated to the analysis of functional near-infrared spectroscopy (fNIRS) data inside the Brainstorm software. |
| Line 6: | Line 6: |
| This tutorial aims to introduce NIRSTORM. NISTORM is a plug-in dedicated to the analysis of functional near-infrared spectroscopy (fNIRS) data inside Brainstorm. | This tutorial covers three main features of the NIRSTORM package: |
| Line 8: | Line 8: |
| This tutorial will cover three main aspects of NIRSTORM: | (1) Data importation and preprocessing |
| Line 10: | Line 10: |
| 1. Data importation and preprocessing 1. Data analysis at the channel level 1. Data analysis on the cortical surface. |
(2) Data analysis at the channel level |
| Line 14: | Line 12: |
| This tutorial assumes that you are already familiar with the Brainstorm environment. If you are not, we encourage you to follow the tutorial 1 to 23. | (3) Data analysis on the cortex after 3D reconstruction. |
| Line 16: | Line 14: |
| <<TableOfContents(3,2)>> | This tutorial assumes that you are already familiar with the Brainstorm environment. If this is not the case, we recommend following Brainstorm tutorials 1 to 23. |
| Line 18: | Line 16: |
| == Introduction == === Presentation of the experiment === The data presented in this tutorial correspond to a finger tapping task perform by one subject using their left, non-dominant hand. NIRS montage was done to target the subject right-motor cortex. Data description: • One subject, one run of 19 minutes acquired with a sampling rate of 10Hz on a CW fNIRS Brainsight device (Rogue-Research Inc., Montreal, Canada) • Finger tapping task: 20 blocks of 10 seconds each, with a rest period of 30 to 60 seconds. • 3 sources, 15 detectors, and 1 proximity detector. • 2 wavelengths: 685nm and 830nm • 3T MRI anatomy processed by FreeSurfer 5.3.0. === Setup === You can install the mtrf manually from Brainstorm directly. For that, go to Plug-ins > fNIRS > nirstorm. {{attachment:figure1_nirstorm_install.png||width="100%"}} == Data Importation == === Import the anatomy === === Access the recording === === Review of recording === |
<<TableOfContents(2,2)>> |
NIRSTORM: a Brainstorm extension dedicated to functional Near Infrared Spectroscopy (fNIRS) data analysis, advanced 3D reconstructions, and optimal probe design.
Authors: Édouard Delaire, Lea Larreur, Dr. Christophe Grova
This tutorial aims to introduce NIRSTORM. NISTORM is a plug-in dedicated to the analysis of functional near-infrared spectroscopy (fNIRS) data inside the Brainstorm software.
This tutorial covers three main features of the NIRSTORM package:
(1) Data importation and preprocessing
(2) Data analysis at the channel level
(3) Data analysis on the cortex after 3D reconstruction.
This tutorial assumes that you are already familiar with the Brainstorm environment. If this is not the case, we recommend following Brainstorm tutorials 1 to 23.
Contents