Brainstorm
  • Comments
  • Menu
    • Attachments
    • Versions
    • Raw Text
    • Print View
  • Login

Software

  • Introduction

  • Gallery

  • Download

  • Installation

Users

  • Tutorials

  • Forum

  • Courses

  • Community

  • Publications

Development

  • What's new

  • What's next

  • About us

  • Contact us

  • Contribute

Revision 78 as of 2016-10-17 14:40:05
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28

Introduction tutorials: Editing process

http://neuroimage.usc.edu/brainstorm/Tutorials

Redactors:

  • Francois Tadel: Montreal Neurological Institute

  • Elizabeth Bock: Montreal Neurological Institute

Reviewers: [current reviewing status]

  • Sylvain Baillet: Montreal Neurological Institute [overview 1-14, edited 20-21]

  • Richard Leahy: University of Southern California [validated 1-20]

  • John Mosher: Cleveland Clinic [edited 22 only]

  • Dimitrios Pantazis: Massachusetts Institute of Technology [validated 1-15]



Tutorial 10: Power spectrum and frequency filters

[CODE]

  • Richard, Hossein: Define reasonable transient durations
  • Richard, Hossein: Describe the band-stop and notch filters in the same way
  • Richard, Hossein: Frequency resolution in the "freqz" plots for high-pass filters under 0.5Hz
  • Richard, John, Hossein, Sylvain: Weird PSD plots for Elekta recordings

[ONLINE DOC]

  • Richard, Hossein: Section Filters specifications for band-stop and notch filters

Tutorial 13: Artifact cleaning with SSP

[CODE]

  • Francois: Check the length needed to filter the recordings (after finishing #10)
    Section SSP Algorithm

Tutorial 15: Import epochs

[ONLINE DOC]

  • Richard, Sylvain, John, Francois: Define recommendations for epoch lengths (after finishing #10)
    Section Epoch length

Tutorial 20: Head modeling

[ONLINE DOC]

  • John: In-depth review of this sensitive tutorial
  • John: Section References

Tutorial 22: Source estimation

[CODE]

  • John: Inverse code: Mixed head models
  • John: Explain the new results obtained with the epilepsy tutorial
  • John: Discuss and validate all the modifications with Alex and Matti
  • John: Cannot process GRAD and MAG at the same time ?
  • Francois: Make the "median" option the default? (changes a lot the range of values)
  • Francois: Call FieldTrip headmodels and beamformers

  • Francois: Add note in Elekta tutorial: Process MAG and GRAD separately
  • Francois: Check respective values of dSPM and Z-score (dSPM 2x higher?)

[ONLINE DOC]

  • John, Richard, Sylvain: Section Source estimation options

  • John, Richard, Sylvain: Section Advanced options

  • John, Richard, Sylvain: Section Equations

  • John, Richard, Sylvain: Section References

  • John, Richard, Sylvain: Why are dSPM values 2x lower than Z-score ?
  • John, Richard, Sylvain: What do with Hui-Ling Beamformers?

Tutorial 24: Time-frequency

[CODE]

  • Francois: Enable option "Hide edge effects" for Hilbert (after finishing #10)

[ONLINE DOC]

  • Francois: Hilbert: Link back to the filters tutorial (after finishing #10)

Tutorial 27: Workflows

  • Add Chi2(log) ?

Tutorial: Dipole scanning

  • Add the description of all the measures in this section.

Tutorial EEG/Epilepsy

  • Why sLORETA?
  • Location with the new code?

Final steps

  • Francois: Remove all the wiki pages that are not used
  • Francois: Check all the links in all the pages
  • Francois: Remove useless images from all tutorials
  • Francois: Reference on ResearchGate, Academia and Google Scholar
    http://neuroimage.usc.edu/brainstorm/Tutorials/AllIntroduction

Connectivity

  • Not documented at all
  • Richard, Sylvain: Define example dataset and precise results to obtain from them
  • Richard: How to deal with unconstrained sources?
    http://neuroimage.usc.edu/forums/showthread.php?2401

  • Richard: How to assess significance from connectivity matrices?
  • Francois, Richard, Hossein: Preparation of a tutorial
  • MoinMoin Powered
  • Python Powered
  • GPL licensed
  • Valid HTML 4.01