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| = iEEG Contact Localization (UNDER CONSTRUCTION) = ''Authors: Chinmay Chinara, Takfarinas Medani.'' Detection, localization and labeling of SEEG depth electrodes is a vital step in studying brain activity. This tutorial can be considered as a precursor to the [[https://neuroimage.usc.edu/brainstorm/Tutorials/Epileptogenicity|Epileptogenicity]] tutorial. __'''NOT FOR CLINICAL USE'''__:<<BR>>The performance characteristics of the methods and software implementation presented in this tutorial have not been certified as medical devices and should be used for research purposes only. <<TableOfContents(3,2)>> == Download and installation == * '''Requirements''': You have already followed all the introduction tutorials and you have a working copy of Brainstorm installed on your computer. * '''CT2MRIREG''': If you are running Brainstorm from the MATLAB environment, for the coregistration between CT and MRI volumes, you need to have the ct2mrireg Anatomy plugin installed on your computer, as a [[https://neuroimage.usc.edu/brainstorm/Tutorials/Plugins|Brainstorm plugin]]. * '''Download the dataset''': * Go to the [[http://neuroimage.usc.edu/bst/download.php|Download]] page of this website, and download the file: '''tutorial_seeg_contact_localization.zip''' * Unzip it in a folder that is not in any of the Brainstorm folders (program folder or database folder) * '''Brainstorm''': * Start Brainstorm (MATLAB scripts or stand-alone version). * Select the menu '''File > Create new protocol'''. Name it "'''TutorialSeegImplantation'''" and select the options: <<BR>>"'''No, use individual anatomy'''",<<BR>>"'''No, use one channel file per acquisition run'''". |
#REDIRECT seeg/ct2mri {{{#!wiki comment Old message in page: "Please note that this tutorial is not available anymore. Please visit the section for the more updated contents: [[https://neuroimage.usc.edu/brainstorm/Tutorials#sEEG-suite:_Stereo-electroencephalography_.28sEEG.29_analysis|sEEG-suite: Stereo-electroencephalography (sEEG) analysis]]" }}} |
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