Full analysis with one script

This tutorial explains how to use the Brainstorm scripting interface to run a full analysis, from the raw recordings to the source reconstruction. It is based on a median nerve stimulation experiment recorded at the Montreal Neurological Institute in 2011 with a CTF MEG 275 system. The sample dataset contains 6 minutes of recordings at 1200Hz for one subject and includes 100 stimulations of each arm.

The tutorial follows the analysis steps detailed in the three advanced tutorials in the category Processing continuous recordings. You should read them before reading this tutorial, to have the explanations that go with the analysis steps.

Creating the analysis pipeline

Select the menu File > Create new protocol. Name it "TutorialScript" and select the options:

• "No, use individual anatomy",

• "Yes, use one channel file per subject".

To start building your analysis pipeline, just click on the "Run" button in the Process1 tab. Then add all the processes listed below.

Import > Import MRI